RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 SLC5A3P53794 718 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 C21orf59P57076 290 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 MTERF2Q49AM1 385 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SEZ6Q53EL9 994 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 XRRA1Q6P2D8 792 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 NAPRTQ6XQN6 538 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 DCDC5Q6ZRR9 648 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 FIBCD1Q8N539 461 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PCDH19Q8TAB3 1148 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 ISL2Q96A47 359 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 GPRASP2Q96D09 838 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 CPNE1Q99829 537 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 TRPV6Q9H1D0 765 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PORCNQ9H237 461 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 WDR55Q9H6Y2 383 aaPredicted RBP11.75□□□□□ -0.53
TROAP-201ENST00000257909 ZBTB26Q9HCK0 441 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 PALMDQ9NP74 551 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 SNX15Q9NRS6 342 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 CLEC11AQ9Y240 323 aa11.75□□□□□ -0.53
TROAP-201ENST00000257909 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 DGKIO75912 1065 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 BAIAP3O94812 1187 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 VAPBO95292 243 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 HALP42357 657 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 MAGEA12P43365 314 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 RPL14P50914 215 aaKnown RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 BCAP31P51572 246 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 CCR3P51677 355 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ATXN3P54252 364 aaPredicted RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 RHDQ02161 417 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TRIM25Q14258 630 aaKnown RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 PTK2BQ14289 1009 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ANKDD1AQ495B1 522 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 XKR3Q5GH77 459 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 SH3PXD2AQ5TCZ1 1133 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ARHGEF16Q5VV41 709 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 MAMDC4Q6UXC1 1216 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 MYO1HQ8N1T3 1032 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TTLL6Q8N841 843 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 GRIN3AQ8TCU5 1115 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 RXFP2Q8WXD0 754 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ACO2Q99798 780 aaKnown RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 CORO1BQ9BR76 489 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ZNF670Q9BS34 389 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 EFHD1Q9BUP0 239 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 YIPF2Q9BWQ6 316 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 CCDC68Q9H2F9 335 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TMEM134Q9H6X4 195 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 SLC38A7Q9NVC3 462 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 UTP6Q9NYH9 597 aaKnown RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 SELENONQ9NZV5 590 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TMED5Q9Y3A6 229 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 PSAT1Q9Y617 370 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 SOBPA7XYQ1 873 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ZNF487B1APH4 448 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 G3V2L1 256 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 NEMP1O14524 444 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 P4HA1P13674 534 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 CD1EP15812 388 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 PDGFRAP16234 1089 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 HOXD12P35452 270 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 PSMD8P48556 350 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TTC30AQ86WT1 665 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 CPXCR1Q8N123 301 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TNIP2Q8NFZ5 429 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 LRTOMTQ8WZ04 291 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 PGBD4Q96DM1 585 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 DUS3LQ96G46 650 aaKnown RBP11.74□□□□□ -0.53
TROAP-201ENST00000257909 PLEKHA8Q96JA3 519 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 TBCBQ99426 244 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 ZNF358Q9NW07 568 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 MTMR10Q9NXD2 777 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 HACD3Q9P035 362 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 CDYLQ9Y232 598 aa11.74□□□□□ -0.53
TROAP-201ENST00000257909 STX16-NPEPL1H3BU86 382 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 HTRA2O43464 458 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 MAP3K6O95382 1288 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 MPOP05164 745 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.537e-8■□□□□ 11.2
TROAP-201ENST00000257909 FUT4P22083 530 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 TCF7P36402 384 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 TNFSF9P41273 254 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 PPP6R3Q5H9R7 873 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 CCDC60Q8IWA6 550 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 AGR3Q8TD06 166 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 TMA16Q96EY4 203 aaKnown RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
TROAP-201ENST00000257909 DCUN1D5Q9BTE7 237 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 BRD8Q9H0E9 1235 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 ANLNQ9NQW6 1124 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 HTR3EA5X5Y0 456 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 C9IYK1 514 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 ESRRBO95718 433 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 AMHP03971 560 aa11.73□□□□□ -0.53
TROAP-201ENST00000257909 APOA4P06727 396 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms