RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 ZNF470Q6ECI4 717 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 NEPROQ6NW34 567 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PALB2Q86YC2 1186 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 NKD2Q969F2 451 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 HSD3B7Q9H2F3 369 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 SIX2Q9NPC8 291 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 VPS45Q9NRW7 570 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PCDHA11Q9Y5I1 949 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 E2F8A0AVK6 867 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 ADAMTS3O15072 1205 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CDH2P19022 906 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PSMB4P28070 264 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 ACLYP53396 1101 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 MSLNQ13421 630 aaPredicted RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CSHL1Q14406 222 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 ATP13A4Q4VNC1 1196 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PPP1R16AQ96I34 528 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CEP41Q9BYV8 373 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 THAP1Q9NVV9 213 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 TMEM161AQ9NX61 479 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 A0A096LPK6 155 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 GOT1P17174 413 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 MSH3P20585 1137 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CES5AQ6NT32 575 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 TRIML2Q8N7C3 387 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 PPP1R13LQ8WUF5 828 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 TSEN34Q9BSV6 310 aaKnown RBP15.29■□□□□ 0.04
UBE4B-201ENST00000253251 EFCAB1Q9HAE3 211 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 TXNRD2Q9NNW7 524 aa15.29■□□□□ 0.04
UBE4B-201ENST00000253251 CLDN5O00501 218 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 RAD51BO15315 384 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 PKN3Q6P5Z2 889 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 POTEHQ6S545 545 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 TUBGCP3Q96CW5 907 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 C1QTNF7Q9BXJ2 289 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ING2Q9H160 280 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 HEY2Q9UBP5 337 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 DYRK1BQ9Y463 629 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 C5orf58C9J3I9 102 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ANKRD65E5RJM6 399 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 MLNP12872 115 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 TPH1P17752 444 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 CYP2A7P20853 494 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 BMPR2Q13873 1038 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 SPDYE7PQ495Y7 208 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 N4BP2L1Q5TBK1 243 aaPredicted RBP15.28■□□□□ 0.04
UBE4B-201ENST00000253251 LRRC57Q8N9N7 239 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 DNAJC16Q9Y2G8 782 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 MGEA5O60502 916 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ENDOD1O94919 500 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 F2P00734 622 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 OR1D2P34982 312 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ARL4DP49703 201 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 RUBCNLQ9H714 662 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 A0A0U1RQJ8 604 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 H3BQF6 201 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ALOX15BO15296 676 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 CLDN11O75508 207 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 TRIM16O95361 564 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 CCND1P24385 295 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 ADRA1DP25100 572 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 CLCN5P51795 746 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 YBEYP58557 167 aaPredicted RBP15.28■□□□□ 0.04
UBE4B-201ENST00000253251 KRT72Q14CN4 511 aa15.28■□□□□ 0.04
UBE4B-201ENST00000253251 AIM2O14862 343 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 GLUD1P00367 558 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 NFKB1P19838 968 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 SP2Q02086 613 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 LYPLAL1Q5VWZ2 237 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 AADACL2Q6P093 401 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 TRIM48Q8IWZ4 208 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 LZICQ8WZA0 190 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 FCRL2Q96LA5 508 aaPredicted RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 QSOX1O00391 747 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 ANXA11P50995 505 aaKnown RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 CAMK2GQ13555 558 aaPredicted RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 LDLRAD1Q5T700 205 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 NPNTQ6UXI9 565 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 ZC3H3Q8IXZ2 948 aaKnown RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 RNF217Q8TC41 542 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 PPP1R36Q96LQ0 422 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 EBNA1BP2Q99848 306 aaKnown RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 THTPAQ9BU02 230 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 MRPS23Q9Y3D9 190 aaKnown RBP15.27■□□□□ 0.04
UBE4B-201ENST00000253251 STYXL1Q9Y6J8 313 aa15.27■□□□□ 0.04
UBE4B-201ENST00000253251 HLA-DPA1P20036 260 aa15.27■□□□□ 0.03
UBE4B-201ENST00000253251 SMAD3P84022 425 aaKnown RBP15.27■□□□□ 0.03
UBE4B-201ENST00000253251 C12orf50Q8NA57 414 aaPredicted RBP15.27■□□□□ 0.03
UBE4B-201ENST00000253251 TCP10LQ8TDR4 215 aa15.27■□□□□ 0.03
UBE4B-201ENST00000253251 CSGALNACT1Q8TDX6 532 aa15.27■□□□□ 0.03
UBE4B-201ENST00000253251 ZBED3Q96IU2 234 aaPredicted RBP15.27■□□□□ 0.03
UBE4B-201ENST00000253251 ZFP42Q96MM3 310 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms