RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 CDH17Q12864 832 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF268Q14587 947 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MON1BQ7L1V2 547 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CPNE8Q86YQ8 564 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TMEM130Q8N3G9 435 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ART4Q93070 314 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CLIP3Q96DZ5 547 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 OXNAD1Q96HP4 312 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TBCBQ99426 244 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ABHD16BQ9H3Z7 469 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ABCC13Q9NSE7 274 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KIAA1257Q9ULG3 409 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 H7C4K7 107 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 BTN3A1O00481 513 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CES2O00748 559 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MYO1DO94832 1006 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RPL22P35268 128 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 HALP42357 657 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 BCL2L1Q07817 233 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 STARD3Q14849 445 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CAPRIN2Q6IMN6 1127 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SHISA4Q96DD7 197 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 FRMD8P1Q9BZ68 369 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 EFCAB1Q9HAE3 211 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MRPL17Q9NRX2 175 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CCDC167Q9P0B6 97 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SRRDQ9UH36 339 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PCDHGB4Q9UN71 923 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 A0A0B4J269 797 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 H0Y858 1186 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF197O14709 1029 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SPAG6O75602 509 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RASSF9O75901 435 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ZCCHC18P0CG32 403 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 FGFR1P11362 822 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CHI3L1P36222 383 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 MRPS6P82932 125 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 UBAP2LQ14157 1087 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 COLEC12Q5KU26 742 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DEFB107AQ8IZN7 70 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 B3GALT6Q96L58 329 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 RNF157Q96PX1 679 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 UHRF1Q96T88 793 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TLR9Q9NR96 1032 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PCDHB5Q9Y5E4 795 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PHGDHO43175 533 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 TIMM44O43615 452 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GSSP48637 474 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 KLC1Q07866 573 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 NRF1Q16656 503 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 BTNL9Q6UXG8 535 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CCDC81Q6ZN84 652 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 CHPFQ8IZ52 775 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 PRCCQ92733 491 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 GFM2Q969S9 779 aaKnown RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 ADGRE3Q9BY15 652 aa4.8□□□□□ -1.64
RAP1B-201ENST00000250559 DMAP1Q9NPF5 467 aaPredicted RBP4.8□□□□□ -1.64
RAP1B-201ENST00000250559 SDR42E2A6NKP2 422 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 CPA3P15088 417 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 BOP1Q14137 746 aaKnown RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 DMC1Q14565 340 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 QPCTQ16769 361 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 SPANXN3Q5MJ09 141 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 PKN3Q6P5Z2 889 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 PSRC1Q6PGN9 363 aaPredicted RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 C4orf22Q6V702 233 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 HMGB4Q8WW32 186 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 JADE3Q92613 823 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 CAVIN3Q969G5 261 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 CMTM5Q96DZ9 223 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 HES6Q96HZ4 224 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 APOPT1Q96IL0 206 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 KLHL5Q96PQ7 755 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 DDX50Q9BQ39 737 aaKnown RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 PCDH9Q9HC56 1237 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 HMGXB4Q9UGU5 601 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 BTRCQ9Y297 605 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 SAC3D1A6NKF1 404 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 F9P00740 461 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 DNAL1Q4LDG9 190 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 PYROXD2Q8N2H3 581 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 STX18Q9P2W9 335 aaKnown RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 A0A1W2PQH9 124 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 NR5A2O00482 541 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 UBDO15205 165 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 SNHG28P0DPA3 235 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 CYLC2Q14093 348 aaPredicted RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 TEDDM1Q5T9Z0 273 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 OR6K2Q8NGY2 324 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 ZNF333Q96JL9 665 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 GPR20Q99678 358 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 CYP3A43Q9HB55 503 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 ST3GAL5Q9UNP4 418 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 FAM95CA0A1B0GW59 222 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 KLRG2A4D1S0 409 aaPredicted RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 USP2O75604 605 aaPredicted RBP4.79□□□□□ -1.64
RAP1B-201ENST00000250559 LMO2P25791 158 aa4.79□□□□□ -1.64
RAP1B-201ENST00000250559 ATXN1P54253 815 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms