RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 FASTKQ14296 549 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SLC25A24Q6NUK1 477 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 SH3BP5LQ7L8J4 393 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 R3HCC1LQ7Z5L2 792 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 IZUMO1Q8IYV9 350 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ARL15Q9NXU5 204 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ARHGAP28Q9P2N2 729 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 LIMD1Q9UGP4 676 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ADGRA3Q8IWK6 1321 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 COX7A2P14406 83 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 TMED10P49755 219 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 NDUFV1P49821 464 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 PFKPQ01813 784 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 IL27RAQ6UWB1 636 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 MTDHQ86UE4 582 aaKnown RBP13.48□□□□□ -0.25
COL1A1-201ENST00000225964 BRSK2Q8IWQ3 736 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 DTNBP1Q96EV8 351 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 OPTCQ9UBM4 332 aa13.48□□□□□ -0.25
COL1A1-201ENST00000225964 MROH7Q68CQ1 1323 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 A0A087X1B8 175 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 OR10H2O60403 315 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 GPR1P46091 355 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 CREMQ03060 361 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 MCL1Q07820 350 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 PAGE2BQ5JRK9 111 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 GPC2Q8N158 579 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 NDUFAF1Q9Y375 327 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ENO4A6NNW6 628 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF862O60290 1169 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 OR6B1O95007 311 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 MYL12AP19105 171 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 NR2C2P49116 596 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 CCNG2Q16589 344 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 DNAJC14Q6Y2X3 702 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 USP50Q70EL3 339 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 DENND1CQ8IV53 801 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RIBC2Q9H4K1 309 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 DNMT3LQ9UJW3 386 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 TRHDEQ9UKU6 1024 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 TRDMT1O14717 391 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ITIH4Q14624 930 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RAP1GAP2Q684P5 730 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF57Q68EA5 555 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 MCOLN2Q8IZK6 566 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 METTL6Q8TCB7 284 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 TMEM79Q9BSE2 394 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 EPS8L2Q9H6S3 715 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 CPS1P31327 1500 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ADCY6O43306 1168 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 GUCY1B2O75343 617 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 VAPBO95292 243 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 PRMT9Q6P2P2 845 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 SV2AQ7L0J3 742 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 KIAA1683Q9H0B3 1180 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 H3BMM5 538 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 CALB2P22676 271 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 TLX1P31314 330 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 ATP5C1P36542 298 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 IQSEC1Q6DN90 963 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 FERD3LQ96RJ6 166 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 RAD21L1Q9H4I0 556 aa13.47□□□□□ -0.25
COL1A1-201ENST00000225964 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
COL1A1-201ENST00000225964 MAGEA13PA6NCF6 341 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 RXRGP48443 463 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 NUP107P57740 925 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 TROAPQ12815 778 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 KRR1Q13601 381 aaKnown RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 OASLQ15646 514 aaKnown RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 PDZK1Q5T2W1 519 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 DDI2Q5TDH0 399 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 RSBN1Q5VWQ0 802 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 TRIQKQ629K1 86 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 TERB1Q8NA31 727 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 DDHD1Q8NEL9 900 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 POLR1EQ9GZS1 481 aaKnown RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 CDHR5Q9HBB8 845 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 MARCH2Q9P0N8 246 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 PCDHA3Q9Y5H8 950 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 C1QTNF3-AMACRE9PGA6 284 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 COPZ1P61923 177 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SLC6A3Q01959 620 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 CNTN2Q02246 1040 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 FAM124AQ86V42 546 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 REXO1L1PQ8IX06 675 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 FIBCD1Q8N539 461 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms