RNA–Protein interactions for RNA: ENST00000224073.5

EDF1-201, Transcript of endothelial differentiation related factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDF1, Length 640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-201ENST00000224073 FAM129BQ96TA1 746 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 C11orf70Q9BRQ4 267 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 MAGEB5Q9BZ81 275 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 RSPH9Q9H1X1 276 aaPredicted RBP13.07□□□□□ -0.32
EDF1-201ENST00000224073 NEUROG2Q9H2A3 272 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
EDF1-201ENST00000224073 WDCPQ9H6R7 721 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 METTL5Q9NRN9 209 aaKnown RBP13.07□□□□□ -0.32
EDF1-201ENST00000224073 ANO10Q9NW15 660 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 FBXL12Q9NXK8 326 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 TMEM63CQ9P1W3 806 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 SIK3Q9Y2K2 1263 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 ASPMQ8IZT6 3477 aa13.07□□□□□ -0.32
EDF1-201ENST00000224073 SPEGQ15772 3267 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 AKAP13Q12802 2813 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 A0A1B0GTW7 788 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 A0A1B0GVM2 712 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 TCAF2A6NFQ2 919 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 K7ERQ8 282 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 BCAT2O15382 392 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 SH3BP5O60239 455 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SNAP91O60641 907 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SRGAP2O75044 1071 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CD59P13987 128 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 GNSP15586 552 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CDK11BP21127 795 aaKnown RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 PMLP29590 882 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SLC8A1P32418 973 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CDH5P33151 784 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 HOXD12P35452 270 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SOX5P35711 763 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 DPP6P42658 865 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 GABRB2P47870 512 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CXCR3P49682 368 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SIM1P81133 766 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 FMO1Q01740 532 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 MYL5Q02045 173 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 UBXN1Q04323 297 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 NCAPHQ15003 741 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 E2F5Q15329 346 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CST6Q15828 149 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 CDO1Q16878 200 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 C15orf59Q2T9L4 293 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 CT47A1Q5JQC4 288 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 FAM131BQ86XD5 332 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 ZNF397Q8NF99 534 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 CADM4Q8NFZ8 388 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 JOSD2Q8TAC2 188 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 DNASE2BQ8WZ79 361 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 PTPRN2Q92932 1015 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 ALG14Q96F25 216 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SPAG5Q96R06 1193 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 BTBD1Q9H0C5 482 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 MUC3BQ9H195 1237 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 HSD3B7Q9H2F3 369 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 SEPT11Q9NVA2 429 aaKnown RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 VPS28Q9UK41 221 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 ANGPTL2Q9UKU9 493 aa13.06□□□□□ -0.32
EDF1-201ENST00000224073 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.06□□□□□ -0.32
EDF1-201ENST00000224073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 EDDM13A0A1B0GTR0 161 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 GOLGA6L22H0YM25 854 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 RNASEH1O60930 286 aaKnown RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 ENDOD1O94919 500 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 MT-CO1P00395 513 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 IL1BP01584 269 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 TPM2P07951 284 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SYPP08247 313 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 GLDCP23378 1020 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 JAM2P57087 298 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SNX16P57768 344 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 CDR2Q01850 454 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 TYRO3Q06418 890 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SEMA3BQ13214 749 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 ZNF177Q13360 481 aaPredicted RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 TTC31Q49AM3 519 aaPredicted RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 KCNT1Q5JUK3 1230 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 PRAMEF14Q5SWL7 426 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 NCEH1Q6PIU2 408 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 LINGO4Q6UY18 593 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 Q6ZVU0 165 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SND1Q7KZF4 910 aaKnown RBP eCLIP13.05□□□□□ -0.321e-7■■■■■ 27.7
EDF1-201ENST00000224073 PIP4P1Q86T03 277 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 OMDQ99983 421 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 FEM1AQ9BSK4 669 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 GAREM1Q9H706 876 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 EBF2Q9HAK2 575 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 ARHGEF38Q9NXL2 777 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SUSD2Q9UGT4 822 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 LIMA1Q9UHB6 759 aaKnown RBP13.05□□□□□ -0.32
EDF1-201ENST00000224073 TMEM59LQ9UK28 342 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 SARDHQ9UL12 918 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 STAP1Q9ULZ2 295 aa13.05□□□□□ -0.32
EDF1-201ENST00000224073 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms