RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 FAM25GB3EWG6 89 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 IRF6O14896 467 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 XPO1O14980 1071 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CCDC130P13994 396 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 HOXB8P17481 243 aaPredicted RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CPA2P48052 419 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FXR1P51114 621 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF470Q6ECI4 717 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FNDC5Q8NAU1 212 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 MTMR9Q96QG7 549 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ERGIC2Q96RQ1 377 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ZMYM5Q9UJ78 669 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 DUSP12Q9UNI6 340 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 PTPN1P18031 435 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 EIF4BP23588 611 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 PRKAG1P54619 331 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 IRF8Q02556 426 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CELF3Q5SZQ8 465 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 RAP1GAP2Q684P5 730 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 TMEM154Q6P9G4 183 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 KCTD14Q9BQ13 255 aaPredicted RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CEP41Q9BYV8 373 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ANKRD65E5RJM6 399 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 UBDO15205 165 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FGF10O15520 208 aaPredicted RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 PAEPP09466 180 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 RARGP13631 454 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CRABP2P29373 138 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 HSPA14Q0VDF9 509 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CDC73Q6P1J9 531 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 RASGRP2Q7LDG7 609 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FAM228AQ86W67 206 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 SLC26A11Q86WA9 606 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 TMEM121Q9BTD3 319 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 POLR1BQ9H9Y6 1135 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FZD1Q9UP38 647 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF510Q9Y2H8 683 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ADGRB3O60242 1522 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 H3BN98 237 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 RGS14O43566 566 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 NFKB1P19838 968 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 AMPD1P23109 780 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 WSCD1Q658N2 575 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 BTN2A1Q7KYR7 527 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 KCNMB4Q86W47 210 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 SCUBE3Q8IX30 993 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 HTR3CQ8WXA8 447 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 VAT1Q99536 393 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 TTLL2Q9BWV7 592 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 KLHL25Q9H0H3 589 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ASB8Q9H765 288 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 CLIC5Q9NZA1 410 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 SLC6A3Q01959 620 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 NR1I3Q14994 352 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 PCBP1Q15365 356 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRPS1-201ENST00000220888 DET1Q7L5Y6 550 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FLCNQ8NFG4 579 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 FERD3LQ96RJ6 166 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 KLHL1Q9NR64 748 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 ABI3Q9P2A4 366 aa10.74□□□□□ -0.69
TRPS1-201ENST00000220888 MAGEC1O60732 1142 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TIPRLO75663 272 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 FTH1P02794 183 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 GABRR2P28476 465 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 CD52P31358 61 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 CYP2C18P33260 490 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 RANBP1P43487 201 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 NR2C2P49116 596 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 PURAQ00577 322 aaKnown RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 DAB2IPQ5VWQ8 1189 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 PDPK2PQ6A1A2 396 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 C11orf63Q6NUN7 778 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 OR2W6PQ8NHA6 318 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TPD52L3Q96J77 140 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 UNKQ9C0B0 810 aaKnown RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 RACGAP1Q9H0H5 632 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TBC1D23Q9NUY8 699 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 INTS7Q9NVH2 962 aaKnown RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 NDRG2Q9UN36 371 aaKnown RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 VAPBO95292 243 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 SERPINB1P30740 379 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 BNC2Q6ZN30 1099 aaPredicted RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 CATSPERGQ6ZRH7 1159 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 ZNF786Q8N393 782 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TMEM132CQ8N3T6 1108 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TDRD5Q8NAT2 981 aaKnown RBP10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TM6SF2Q9BZW4 377 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 ISCUQ9H1K1 167 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 ATAD3AQ9NVI7 634 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 GNPTGQ9UJJ9 305 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 CDH9Q9ULB4 789 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 WWP2O00308 870 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 TRIM13O60858 407 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 HSMCR30P0CW71 290 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 GLUD2P49448 558 aa10.73□□□□□ -0.69
TRPS1-201ENST00000220888 RARRES1P49788 294 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms