RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TMEM209Q96SK2 561 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 TUBB6Q9BUF5 446 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.26
CTNS-201ENST00000046640 ACSS2Q9NR19 701 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 RPS6KL1Q9Y6S9 549 aa13.46□□□□□ -0.26
CTNS-201ENST00000046640 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 CIB2O75838 187 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 STK10O94804 968 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 CHRNA1P02708 482 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 PAPOLAP51003 745 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 TRPV1Q8NER1 839 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 STX18Q9P2W9 335 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 PPM1HQ9ULR3 514 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 ALDOAP04075 364 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 CTGFP29279 349 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 DAOAP59103 153 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
CTNS-201ENST00000046640 PDK1Q15118 436 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 IRGCQ6NXR0 463 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 KDELC2Q7Z4H8 507 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 CMC1Q7Z7K0 106 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 CRLF3Q8IUI8 442 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 ULK2Q8IYT8 1036 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 SCAMP5Q8TAC9 235 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 LRRC39Q96DD0 335 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 ARHGAP39Q9C0H5 1083 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 TKTL2Q9H0I9 626 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 MOCS1Q9NZB8 636 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 ZNF180Q9UJW8 692 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 PACSIN3Q9UKS6 424 aa13.45□□□□□ -0.26
CTNS-201ENST00000046640 LOC100653049A0A140TA62 436 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 GABRDO14764 452 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 ZBTB24O43167 697 aaPredicted RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 ITM2AO43736 263 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 ZMPSTE24O75844 475 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 KRT34O76011 436 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 PDE5AO76074 875 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 ANPEPP15144 967 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 SAT1P21673 171 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 CD52P31358 61 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 TRIM32Q13049 653 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 PCBP1Q15365 356 aaKnown RBP eCLIP13.44□□□□□ -0.26
CTNS-201ENST00000046640 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 RWDD4Q6NW29 188 aaKnown RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 AGMOQ6ZNB7 445 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 LIMS2Q7Z4I7 341 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 AGR3Q8TD06 166 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 FCRL3Q96P31 734 aaPredicted RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 AGAP2Q99490 1192 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 ZNF184Q99676 751 aaPredicted RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 SLC7A8Q9UHI5 535 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 DNAJC6O75061 913 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 LRPAP1P30533 357 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 THPOP40225 353 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 RALGPS1Q5JS13 557 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 CFAP157Q5JU67 520 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 CERCAMQ5T4B2 595 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 N4BP2L1Q5TBK1 243 aaPredicted RBP13.44□□□□□ -0.26
CTNS-201ENST00000046640 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 RASSF3Q86WH2 238 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 TMPRSS6Q8IU80 811 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 MTBPQ96DY7 904 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 MOCOSQ96EN8 888 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 WDCPQ9H6R7 721 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 TXNDC16Q9P2K2 825 aa13.44□□□□□ -0.26
CTNS-201ENST00000046640 KLHL33A6NCF5 533 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 TGDSO95455 350 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 LTFP02788 710 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 PTPN3P26045 913 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 FDFT1P37268 417 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 DPYSQ14117 519 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 PDE1CQ14123 709 aaPredicted RBP13.43□□□□□ -0.26
CTNS-201ENST00000046640 KRT72Q14CN4 511 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 C6orf163Q5TEZ5 329 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 VWA5B1Q5TIE3 1220 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ATG16L1Q676U5 607 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 LRRC8BQ6P9F7 803 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ARCQ7LC44 396 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ARHGAP24Q8N264 748 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ZNF669Q96BR6 464 aaPredicted RBP13.43□□□□□ -0.26
CTNS-201ENST00000046640 MFSD3Q96ES6 412 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 KATNAL1Q9BW62 490 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 COLEC11Q9BWP8 271 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 DNAI2Q9GZS0 605 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 CAB39LQ9H9S4 337 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 TMLHEQ9NVH6 421 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 OR12D3Q9UGF7 316 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 DCLK1O15075 740 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 OPHN1O60890 802 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 ITGB1P05556 798 aa13.43□□□□□ -0.26
CTNS-201ENST00000046640 SCNN1AP37088 669 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms