RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cldn2O88552 230 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Wee1P47810 646 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 4930502E18RikQ14BQ3 236 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 MlipQ5FW52 269 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Grik1Q60934 836 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Hsph1Q61699 858 aaKnown RBP23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Rad54bQ6PFE3 886 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Otop2Q80SX5 563 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gabbr2Q80T41 940 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ppp1r15bQ8BFW3 697 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Fra10ac1Q8BP78 315 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Slc25a3Q8VEM8 357 aaKnown RBP23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Spns2Q91VM4 549 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Usp3Q91W36 520 aaKnown RBP23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Zfp617Q91WM0 559 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Cog2Q921L5 731 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Yaf2Q99LW6 179 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Marc1Q9CW42 340 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Xpo7Q9EPK7 1087 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 AatfQ9JKX4 526 aaKnown RBP23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Krt71Q9R0H5 524 aa23.26■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Vsig10l2A0A140LHF2 776 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 H2-T24F8VQG4 363 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Zfy1P10925 782 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 GlulP15105 373 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ccnb1P24860 430 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 RnaselQ05921 735 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Mcm9Q2KHI9 1134 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 SpertQ32MG2 446 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Itga1Q3V3R4 1179 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ubn1Q4G0F8 1135 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 HnrnpdQ60668 355 aaKnown RBP23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 PterQ60866 349 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Rbl2Q64700 1135 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Olfr1057Q7TR75 315 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Baiap2l2Q80Y61 522 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Slc7a4Q8BLQ7 635 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Mettl21cQ8BLU2 248 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gpr20Q8BYC4 358 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Tmem120aQ8C1E7 343 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gdap1l1Q8VE33 370 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Syt17Q920M7 470 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Kbtbd12Q9D618 625 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Snx1Q9WV80 522 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Mbd1Q9Z2E2 636 aa23.25■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Vwa5b1A9Z1V5 1215 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Abhd12bG3UZN6 359 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Dpysl2O08553 572 aaKnown RBP23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Mllt10O54826 1068 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Brms1lQ3U1T3 323 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 TCAIMQ66JZ4 499 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Q6DFW0 481 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Sec23ipQ6NZC7 998 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Vmn2r26Q6TAC4 855 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Mib1Q80SY4 1006 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gpr61Q8C010 449 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Sh2d5Q8JZW5 429 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Sytl2Q99N50 950 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 PrebQ9WUQ2 417 aa23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Stau1Q9Z108 487 aaKnown RBP23.24■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Klhdc7bA0A286YD60 1263 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Card9A2AIV8 536 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Cdh18E9Q9Q6 790 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ccl4P14097 92 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 DesP31001 469 aaKnown RBP23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Defa-rs12P50716 91 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 CidecP56198 239 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Slc24a2Q14BI1 711 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Znf821Q6PD05 413 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ip6k2Q80V72 448 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Wdr59Q8C0M0 992 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Gsto2Q8K2Q2 248 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ces2aQ8QZR3 558 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Fbxo21Q8VDH1 627 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 ParvbQ9ES46 365 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 TyrP11344 533 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ces1cP23953 554 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ptger1P35375 405 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Rab6bP61294 208 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Cdk16Q04735 496 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 FaxcQ3UMF9 409 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 McuQ3UMR5 350 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 C1qtnf6Q6IR41 264 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Q810S2 196 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 AopepQ8BXQ6 817 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Fam129bQ8R1F1 749 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Pcdha1Q91Y21 948 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Sfxn1Q99JR1 322 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Psma8Q9CWH6 250 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ccdc83Q9D4V3 305 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 DmgdhQ9DBT9 869 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 IkbipQ9DBZ1 373 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Htra2Q9JIY5 458 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Htatip2Q9Z2G9 242 aa23.23■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Serpina3iD3Z450 408 aa23.22■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Tcf3P15806 651 aa23.22■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Cd247P24161 164 aa23.22■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ybx1P62960 322 aaKnown RBP23.22■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Rrp36Q3UFY0 244 aaKnown RBP23.22■■□□□ 1.31
Scn1b-201ENSMUST00000098548 Ceacam5Q3UKK2 947 aa23.22■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms