RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Galnt10Q6P9S7 603 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rps6ka5Q8C050 863 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Kctd2Q8CEZ0 266 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Prpf4Q9DAW6 521 aaKnown RBP10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Aldh1a3Q9JHW9 512 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pex11bQ9Z210 259 aa10.19□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Igkv16-104A0A0B4J1I1 116 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ring1O35730 406 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 TyrP11344 533 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Lhx3P50481 400 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm14685Q52KH6 695 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rap1gap2Q5SVL6 712 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cspg5Q71M36 566 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Baiap2l2Q80Y61 522 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Trim60Q8VI40 466 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pcdha1Q91Y21 948 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gimap4Q99JY3 219 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 MceeQ9D1I5 178 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Necab3Q9D6J4 353 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 D7h11orf16Q9JJR6 402 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Angptl3Q9R182 455 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Phf2Q9WTU0 1096 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Trpm6Q8CIR4 2028 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Prrg1A2BFE8 218 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm16427J3QN52 483 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm7995L7N2E4 160 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 TceancQ3US16 359 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Fbxo39Q5NBU5 443 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PterQ60866 349 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 RhocQ62159 193 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Hspbap1Q8BK58 483 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 HhatQ8BMT9 499 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Q8CC96 669 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ipo11Q8K2V6 975 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slc25a3Q8VEM8 357 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 NelfcdQ922L6 591 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vps28Q9D1C8 221 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cwc15Q9JHS9 229 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm11758A2BEI6 360 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm11757A2BEI8 360 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Nhsl2B1AXH1 854 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Wdr95D3Z7A8 784 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vmn1r176G3UW31 304 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Dpysl2O08553 572 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gfra2O08842 464 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Hsd17b7O88736 334 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Sp1O89090 784 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Becn2P0DM65 447 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PtpaP58389 323 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rnf10Q3UIW5 804 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Spire1Q52KF3 598 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gcnt3Q5JCT0 437 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Lemd2Q6DVA0 511 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Orai2Q8BH10 250 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Noc4lQ8BHY2 516 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Frmd4aQ8BIE6 1020 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tgif2Q8C0Y1 237 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Camkk1Q8VBY2 505 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Olfr847Q8VFF4 312 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 DlstQ9D2G2 454 aa10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Stau1Q9Z108 487 aaKnown RBP10.18□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Srsf11E9Q6E5 511 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Prf1P10820 554 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Rpl22P67984 128 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pitx1P70314 315 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Atp8a1P70704 1164 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Eml1Q05BC3 814 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cd244Q07763 397 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Trmt10cQ3UFY8 414 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Aldh1a2Q62148 518 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vmn2r26Q6TAC4 855 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Efr3bQ6ZQ18 817 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Snx14Q8BHY8 964 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Pde10aQ8CA95 790 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vmn1r18Q8R2C8 299 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Slc30a5Q8R4H9 761 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mgrn1Q9D074 532 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Edf1Q9JMG1 148 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Adamts5Q9R001 930 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Kat6aQ8BZ21 2003 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vwa8Q8CC88 1905 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Arhgef37A1IGU4 676 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Ttc23lA6H6E9 458 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm16430A6X8J1 155 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Zfp715G3X9T1 886 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Entpd2O55026 495 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Adrb1P34971 466 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 SftpbP50405 377 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tubb4bP68372 445 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 PrlrQ08501 608 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tmc5Q32NZ6 967 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Them6Q80ZW2 207 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 NemfQ8CCP0 1064 aaKnown RBP10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Mtrf1Q8K126 446 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Atp6v1e2Q9D593 226 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 ApipQ9WVQ5 241 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Gm21964A0A1W2P7S4 437 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Vmn1r39G3UWE6 305 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Cyp8b1O88962 500 aa10.17□□□□□ -0.78
Ccdc38-201ENSMUST00000092215 Tap1P21958 724 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 51.6 ms