RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 MtrA6H5Y3 1253 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zcchc7B1AX39 541 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ifi213D3Z5G0 586 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nos2P29477 1144 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Aldh3a1P47739 453 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 NrlP54846 237 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Spink5Q148R4 1017 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Znf569Q80W31 679 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mapkap1Q8BKH7 522 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tp53bp2Q8CG79 1128 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ttc23Q8CHY7 488 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vps50Q8CI71 964 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 LzicQ8K3C3 190 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr693Q8VF89 316 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Me2Q99KE1 589 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pld1Q9Z280 1074 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cntnap1O54991 1385 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 4921501E09RikA0A0R4J054 908 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Per1O35973 1291 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Il2rbP16297 539 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 GckP52792 465 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zfp560Q3URI6 754 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lag3Q61790 521 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 CbarpQ66L44 698 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 C6.1alQ7M757 291 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pan2Q8BGF7 1200 aaKnown RBP10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 TbcdQ8BYA0 1196 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Dus1lQ8C2P3 475 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Syt15Q8C6N3 418 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gprc5bQ923Z0 410 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vwa7Q9JHA8 891 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Clcn5Q9WVD4 746 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ap4s1Q9WVL1 144 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kcnq2Q9Z351 759 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rpl9-ps1S4R1R7 191 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Prrg1A2BFE8 218 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm5930D3Z257 264 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm6408J3QNG1 320 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Galnt4O08832 578 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nfkb1P25799 971 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 S100a9P31725 113 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trafd1Q3UDK1 580 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Rbm44Q3V089 1013 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ankrd42Q3V096 527 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Naif1Q6PFD7 327 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zswim5Q80TC6 1188 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Samd4bQ80XS6 687 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tubgcp5Q8BKN5 1024 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Mettl21cQ8BLU2 248 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Tmem220Q8BP07 167 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Lrrc4cQ8C031 640 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pnpla8Q8K1N1 776 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 OlahQ8R197 265 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Reep3Q99KK1 254 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ecrg4Q99LS0 148 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vps28Q9D1C8 221 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cyp4f14Q9EP75 524 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 B4galt5Q9JMK0 388 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Zscan5bB2RTN3 468 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ddr1Q03146 911 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 4930430A15RikQ05AC5 485 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pyroxd1Q3TMV7 498 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slfn4Q3UV66 602 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Kctd8Q50H33 476 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 ChpfQ6IQX7 774 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Cand2Q6ZQ73 1235 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Orai2Q8BH10 250 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Robo4Q8C310 1012 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Acsm2Q8K0L3 575 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Olfr589Q8VGV8 317 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Trmt10bQ9D075 318 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ppp2r3cQ9JK24 453 aa10.49□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm5485A0A1D5RM98 91 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Gm17019K7N6W5 255 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 LgmnO89017 435 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Vps26aP40336 327 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccng1P51945 294 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Arf4P61750 180 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ano7Q14AT5 859 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Slc17a7Q3TXX4 560 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 XiapQ60989 496 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Znf512Q69Z99 562 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Stk40Q7TNL3 435 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Fbxw21Q8BI38 468 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 FsbpQ8BKE5 299 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ifi44Q8BV66 422 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Snx16Q8C080 344 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 IlkapQ8R0F6 392 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 CenpsQ9D084 142 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ccdc130Q9D516 385 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Osbpl10S4R1M9 766 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Smok3cA0A087WSF2 504 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pcnx4Q3UVY5 1174 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Adrbk2Q3UYH7 688 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Flot2Q60634 428 aaKnown RBP10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Nlrp9cQ66X01 1004 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Neto2Q8BNJ6 525 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pyhin1Q8BV49 420 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Ldhal6bQ8BVP2 382 aa10.48□□□□□ -0.73
Ccdc40-201ENSMUST00000035935 Pomgnt2Q8BW41 605 aa10.48□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms