RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Pcsk6F6XJP7 959 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr292F8VQ84 308 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 HcrtO55241 130 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Hoxc10P31257 342 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cd36Q08857 472 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ndrg1Q62433 394 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mysm1Q69Z66 819 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nomo1Q6GQT9 1214 aaKnown RBP13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Otud6aQ6IE21 290 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Efr3bQ6ZQ18 817 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr23Q7TRX4 325 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Xylt1Q811B1 953 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ppp6r2Q8R3Q2 923 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcdha6Q91Y14 946 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Msi2Q920Q6 346 aaKnown RBP13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Kdelc1Q9JHP7 502 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 Hs6st3Q9QYK4 470 aa13.72□□□□□ -0.21
Nup88-201ENSMUST00000035283 4930469K13RikA0A286YDB2 92 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ttll11A4Q9F4 727 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mkrn2osD3Z393 217 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ptpn1P35821 432 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 PpargP37238 505 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Aldh3a1P47739 453 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 TdgP56581 421 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 ThraP63058 492 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Mettl17Q3U2U7 461 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm1587Q3UT80 123 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 AcdQ5EE38 416 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 PhgdhQ61753 533 aaKnown RBP13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 HltfQ6PCN7 1003 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gpr139Q80UC8 345 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Slc18a2Q8BRU6 517 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 LnpepQ8C129 1025 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Snrnp27Q8K194 155 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Olfr397Q8VEZ6 315 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pcdha1Q91Y21 948 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tmco1Q921L3 188 aaKnown RBP13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tbc1d21Q9D9D3 336 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Spock2Q9ER58 423 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 PollQ9QXE2 573 aaKnown RBP13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Ggps1Q9WTN0 300 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nrf1Q9WU00 503 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 VarsQ9Z1Q9 1263 aaKnown RBP13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Efcab12V9GXH0 673 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gimd1E9PW74 217 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fbxl18E9PYR1 771 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3383J3QQ59 259 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3164L7N2B9 238 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Gm3239L7N2D9 227 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Matn2O08746 956 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Arf4P61750 180 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 NxnP97346 435 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Nqo1Q64669 274 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Tmem151aQ6GQT5 468 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Sec16bQ91XT4 1051 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pip4k2cQ91XU3 421 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Pih1d1Q9CQJ2 290 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Micu3Q9CTY5 523 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Dnajb7Q9QYI8 312 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Fiz1Q9WTJ4 500 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 RecqlQ9Z129 648 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Shcbp1Q9Z179 668 aa13.71□□□□□ -0.21
Nup88-201ENSMUST00000035283 Cldn24D3YXJ9 220 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Plekha5E9Q6H8 1269 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 MutP16332 748 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Ephx2P34914 554 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Sipa1P46062 1037 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Emilin3P59900 758 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 RnaselQ05921 735 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Pnpla5Q32LZ8 432 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Krt26Q3TRJ4 462 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Snx27Q3UHD6 539 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Myo1gQ5SUA5 1024 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Psd4Q8BLR5 1005 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gtf3c4Q8BMQ2 817 aaKnown RBP13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tmtc3Q8BRH0 920 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Slco6c1Q8C0X7 706 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Prpf39Q8K2Z2 665 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Adam32Q8K410 754 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tspan14Q8QZY6 270 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Psmd12Q9D8W5 456 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Chek2Q9Z265 546 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rnf19bA2A7Q9 732 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Phf11A6H5X4 337 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Usp51B1AY15 661 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Gm10719E9Q7T3 227 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 RapsnP12672 412 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tubgcp3P58854 905 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rpl26P61255 145 aaKnown RBP13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Kir3dl1P83555 432 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Vps45P97390 570 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fam117bQ3U3E2 584 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fbxw2Q60584 422 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Fastkd1Q6DI86 829 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Suds3Q8BR65 328 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Rmdn2Q8BSE0 410 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 TbcdQ8BYA0 1196 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Dis3lQ8C0S1 1053 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Tbc1d13Q8R3D1 400 aa13.7□□□□□ -0.22
Nup88-201ENSMUST00000035283 Hacd2Q9D3B1 254 aa13.7□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms