RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 GabrqQ9JLF1 638 aa21.13■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Rhox3fA2ANE1 215 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 2610008E11RikG3X964 669 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Gm3187M0QWW3 260 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Psma3O70435 255 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Slc2a7P0C6A1 513 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 ItgavP43406 1044 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Aldh2P47738 519 aaKnown RBP21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 YwhahP68510 246 aaKnown RBP21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Grm5Q3UVX5 1203 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Phactr4Q501J7 694 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Eif2dQ61211 570 aaKnown RBP21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Atp2a3Q64518 1038 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 ScapQ6GQT6 1276 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Prr18Q6PAN7 307 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Q922M7 232 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Cttnbp2nlQ99LJ0 638 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Serbp1Q9CY58 407 aaKnown RBP21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Tbc1d20Q9D9I4 402 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Capn7Q9R1S8 813 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Stk11Q9WTK7 436 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Hao1Q9WU19 370 aa21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Top3bQ9Z321 862 aaKnown RBP21.12■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Igkv5-43A0A0B4J1J2 115 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Skint7A7XV04 395 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Vmn2r67K7N6T2 851 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Krt10P02535 570 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Atp5bP56480 529 aaKnown RBP21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ranbp9P69566 653 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Tmem65Q4VAE3 234 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ppp1r13lQ5I1X5 824 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Klra8Q60682 266 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Grid2Q61625 1007 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Dnajc1Q61712 552 aaKnown RBP21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ankrd6Q69ZU8 712 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Tmcc1Q69ZZ6 649 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 ChpfQ6IQX7 774 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 PreplQ8C167 725 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Fam204aQ8C6C7 236 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Nlrp4bQ8C6J9 863 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Asb14Q8C6Y6 587 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Pcdhb11Q91UZ8 797 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Pqbp1Q91VJ5 263 aaKnown RBP21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ppa2Q91VM9 330 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Mrps2Q924T2 291 aaKnown RBP21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Mat2bQ99LB6 334 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Scamp5Q9JKD3 235 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Il20Q9JKV9 176 aa21.11■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Gm13941A2AJ38 245 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Rtn2O70622 471 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Klc2O88448 599 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Meaf6Q2VPQ9 191 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ccdc85aQ5SP85 500 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Dusp11Q6NXK5 321 aaKnown RBP21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Zfp512bQ6PHP4 879 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Sort1Q6PHU5 825 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 D8Ertd738eQ8R1F0 94 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Stx18Q8VDS8 334 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Agap3Q8VHH5 910 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Dhrs7bQ99J47 323 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Akirin1Q99LF1 191 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 LiasQ99M04 373 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Kcng1A2BDX4 514 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Krt28A6BLY7 462 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Slfn8B1ARD8 910 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Vmn2r27D3YUK6 857 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ccdc8D3YZV8 685 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Zfp963D3Z2T8 383 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Gm5415E9PXF3 478 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Oaz2O08608 189 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Fgf10O35565 209 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Dsg3O35902 993 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Syngr1O55100 234 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Yy1Q00899 414 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Gstt2Q61133 244 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 WlsQ6DID7 541 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Far2Q7TNT2 515 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Pglyrp2Q8VCS0 530 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Atpaf2Q91YY4 289 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Dhrs1Q99L04 313 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Ndufaf7Q9CWG8 436 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Q9D979 236 aa21.1■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Myo18aQ9JMH9 2050 aaKnown RBP21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Vmn2r72D3Z4N8 856 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Slc1a6O35544 561 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Tnk2O54967 1055 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 P01641 117 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 ArvcfP98203 962 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Caprin2Q05A80 1031 aaKnown RBP21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Trafd1Q3UDK1 580 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 RadilQ69Z89 1099 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 DstykQ6XUX1 927 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Nup54Q8BTS4 510 aaKnown RBP21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Prr33Q8C494 260 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Fam126bQ8C729 530 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 CherpQ8CGZ0 936 aaKnown RBP21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Wdr11Q8K1X1 1223 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 HibchQ8QZS1 385 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 Zcchc14Q8VIG0 956 aa21.09■□□□□ 0.97
Cdx1-201ENSMUST00000025521 AclyQ91V92 1091 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms