RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeastyeast

Gene HHF1, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HHF1YBR009C FAA3P39002 694 aa4.14□□□□□ -1.75
HHF1YBR009C SAM37P50110 327 aa4.14□□□□□ -1.75
HHF1YBR009C FOL1P53848 824 aa4.14□□□□□ -1.75
HHF1YBR009C YNL011CP53980 444 aa4.14□□□□□ -1.75
HHF1YBR009C CDC55Q00362 526 aa4.14□□□□□ -1.75
HHF1YBR009C CAB1Q04430 367 aa4.14□□□□□ -1.75
HHF1YBR009C SRF1Q12516 437 aa4.14□□□□□ -1.75
HHF1YBR009C RPS6AP0CX37 236 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C RPS6BP0CX38 236 aaPredicted RBP4.13□□□□□ -1.75
HHF1YBR009C STE6P12866 1290 aa4.13□□□□□ -1.75
HHF1YBR009C VMA4P22203 233 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C FUI1P38196 639 aa4.13□□□□□ -1.75
HHF1YBR009C YHR020WP38708 688 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C YHL008CP38750 627 aa4.13□□□□□ -1.75
HHF1YBR009C SPF1P39986 1215 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C CHZ1P40019 153 aaPredicted RBP4.13□□□□□ -1.75
HHF1YBR009C PTK2P47116 818 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C SUT1P53032 299 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C ITC1P53125 1264 aa4.13□□□□□ -1.75
HHF1YBR009C TYW3P53177 273 aa4.13□□□□□ -1.75
HHF1YBR009C NOP14Q99207 810 aaKnown RBP4.13□□□□□ -1.75
HHF1YBR009C ERR1P0CX10 437 aa4.12□□□□□ -1.75
HHF1YBR009C ERR2P0CX11 437 aa4.12□□□□□ -1.75
HHF1YBR009C CDC34P14682 295 aa4.12□□□□□ -1.75
HHF1YBR009C MRC1P25588 1096 aa4.12□□□□□ -1.75
HHF1YBR009C RAD27P26793 382 aa4.12□□□□□ -1.75
HHF1YBR009C YKL069WP36088 180 aa4.12□□□□□ -1.75
HHF1YBR009C VPS24P36095 224 aaKnown RBP4.12□□□□□ -1.75
HHF1YBR009C CIC1P38779 376 aaKnown RBP4.12□□□□□ -1.75
HHF1YBR009C ERP2P39704 215 aa4.12□□□□□ -1.75
HHF1YBR009C BOI2P39969 1040 aa4.12□□□□□ -1.75
HHF1YBR009C YNR029CP53729 429 aaKnown RBP4.12□□□□□ -1.75
HHF1YBR009C TMA64Q04600 565 aaKnown RBP4.12□□□□□ -1.75
HHF1YBR009C BRE1Q07457 700 aaKnown RBP4.12□□□□□ -1.75
HHF1YBR009C NOC3Q07896 663 aaPredicted RBP4.12□□□□□ -1.75
HHF1YBR009C OPI10Q08202 246 aa4.12□□□□□ -1.75
HHF1YBR009C FLC1Q08967 793 aa4.12□□□□□ -1.75
HHF1YBR009C ARG82P07250 355 aa4.11□□□□□ -1.75
HHF1YBR009C DAT1P13483 248 aaKnown RBP4.11□□□□□ -1.75
HHF1YBR009C TRX2P22803 104 aaKnown RBP4.11□□□□□ -1.75
HHF1YBR009C PWP2P25635 923 aaKnown RBP4.11□□□□□ -1.75
HHF1YBR009C DUT1P33317 147 aa4.11□□□□□ -1.75
HHF1YBR009C PAF1P38351 445 aa4.11□□□□□ -1.75
HHF1YBR009C RSP5P39940 809 aaKnown RBP4.11□□□□□ -1.75
HHF1YBR009C AIM21P40563 679 aa4.11□□□□□ -1.75
HHF1YBR009C AAD14P42884 376 aa4.11□□□□□ -1.75
HHF1YBR009C TY4A-JP47023 414 aa4.11□□□□□ -1.75
HHF1YBR009C PEX8P53248 589 aa4.11□□□□□ -1.75
HHF1YBR009C CEF1Q03654 590 aaPredicted RBP4.11□□□□□ -1.75
HHF1YBR009C ADR1P07248 1323 aa4.11□□□□□ -1.75
HHF1YBR009C THS1P04801 734 aaKnown RBP4.1□□□□□ -1.75
HHF1YBR009C SWI5P08153 709 aa4.1□□□□□ -1.75
HHF1YBR009C PRE9P23638 258 aaKnown RBP4.1□□□□□ -1.75
HHF1YBR009C UTR2P32623 467 aa4.1□□□□□ -1.75
HHF1YBR009C MRPS18P42847 217 aa4.1□□□□□ -1.75
HHF1YBR009C KIP3P53086 805 aaKnown RBP4.1□□□□□ -1.75
HHF1YBR009C YGR053CP53234 283 aa4.1□□□□□ -1.75
HHF1YBR009C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
HHF1YBR009C DAL4Q04895 635 aa4.1□□□□□ -1.75
HHF1YBR009C NKP1Q12493 238 aa4.1□□□□□ -1.75
HHF1YBR009C CCP1P00431 361 aa4.09□□□□□ -1.75
HHF1YBR009C RPP2BP02400 110 aaKnown RBP4.09□□□□□ -1.75
HHF1YBR009C DLD1P32891 587 aa4.09□□□□□ -1.75
HHF1YBR009C NUP85P46673 744 aa4.09□□□□□ -1.75
HHF1YBR009C BSC2Q05611 235 aa4.09□□□□□ -1.75
HHF1YBR009C YOR378WQ08902 515 aa4.09□□□□□ -1.75
HHF1YBR009C FAL1Q12099 399 aaKnown RBP4.09□□□□□ -1.75
HHF1YBR009C MCD1Q12158 566 aa4.09□□□□□ -1.75
HHF1YBR009C WTM2Q12206 467 aa4.09□□□□□ -1.75
HHF1YBR009C RPL8AP17076 256 aaKnown RBP4.08□□□□□ -1.76
HHF1YBR009C MET22P32179 357 aa4.08□□□□□ -1.76
HHF1YBR009C MPE1P35728 441 aaKnown RBP4.08□□□□□ -1.76
HHF1YBR009C TBS1P38114 1094 aa4.08□□□□□ -1.76
HHF1YBR009C DLD3P39976 496 aaKnown RBP4.08□□□□□ -1.76
HHF1YBR009C YGR125WP53273 1036 aa4.08□□□□□ -1.76
HHF1YBR009C LSC2P53312 427 aa4.08□□□□□ -1.76
HHF1YBR009C RSC4Q02206 625 aa4.08□□□□□ -1.76
HHF1YBR009C SVL3Q03088 825 aaKnown RBP4.08□□□□□ -1.76
HHF1YBR009C SPO20Q04359 397 aa4.08□□□□□ -1.76
HHF1YBR009C NTG2Q08214 380 aa4.08□□□□□ -1.76
HHF1YBR009C CAN1P04817 590 aa4.07□□□□□ -1.76
HHF1YBR009C MRPL33P20084 86 aa4.07□□□□□ -1.76
HHF1YBR009C BAS1P22035 811 aa4.07□□□□□ -1.76
HHF1YBR009C CDC11P32458 415 aa4.07□□□□□ -1.76
HHF1YBR009C SMC1P32908 1225 aa4.07□□□□□ -1.76
HHF1YBR009C STE5P32917 917 aa4.07□□□□□ -1.76
HHF1YBR009C PRP40P33203 583 aaKnown RBP4.07□□□□□ -1.76
HHF1YBR009C YBR184WP38299 523 aa4.07□□□□□ -1.76
HHF1YBR009C HXT5P38695 592 aa4.07□□□□□ -1.76
HHF1YBR009C COG4Q06096 861 aa4.07□□□□□ -1.76
HHF1YBR009C INP54Q08227 384 aaKnown RBP4.07□□□□□ -1.76
HHF1YBR009C SLX4Q12098 748 aa4.07□□□□□ -1.76
HHF1YBR009C TMA17Q12513 150 aa4.07□□□□□ -1.76
HHF1YBR009C SFP1P32432 683 aa4.06□□□□□ -1.76
HHF1YBR009C UTP7P40055 554 aaKnown RBP4.06□□□□□ -1.76
HHF1YBR009C YJR098CP47139 656 aa4.06□□□□□ -1.76
HHF1YBR009C YJR120WP47157 116 aa4.06□□□□□ -1.76
HHF1YBR009C YPL109CQ02981 657 aa4.06□□□□□ -1.76
HHF1YBR009C GIR2Q03768 265 aaPredicted RBP4.06□□□□□ -1.76
HHF1YBR009C YDR444WQ04093 687 aa4.06□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms