RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 HDGFL1Q5TGJ6 251 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 SLC12A5Q9H2X9 1139 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 SLC3A2P08195 630 aaKnown RBP14.36□□□□□ -0.11
MACF1-235ENST00000641104 EFCAB5A4FU69 1503 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 PDCP20941 246 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 SULT6B1Q6IMI4 303 aa14.36□□□□□ -0.11
MACF1-235ENST00000641104 FAM177BA6PVY3 158 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
MACF1-235ENST00000641104 CCT4P50991 539 aaKnown RBP14.35□□□□□ -0.11
MACF1-235ENST00000641104 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.35□□□□□ -0.11
MACF1-235ENST00000641104 CABP1Q9NZU7 370 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 CC2D2AQ9P2K1 1620 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 ARAP1Q96P48 1450 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 CCDC158Q5M9N0 1113 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 NOB1Q9ULX3 412 aaKnown RBP14.35□□□□□ -0.11
MACF1-235ENST00000641104 NAP1L1P55209 391 aaKnown RBP14.35□□□□□ -0.11
MACF1-235ENST00000641104 RABEP1Q15276 862 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 STRN4Q9NRL3 753 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 NEK4P51957 841 aa14.35□□□□□ -0.11
MACF1-235ENST00000641104 LETM1O95202 739 aaPredicted RBP14.34□□□□□ -0.11
MACF1-235ENST00000641104 IKQ13123 557 aaPredicted RBP14.34□□□□□ -0.11
MACF1-235ENST00000641104 GNL3LQ9NVN8 582 aaKnown RBP14.34□□□□□ -0.11
MACF1-235ENST00000641104 CT47A1Q5JQC4 288 aaPredicted RBP14.34□□□□□ -0.11
MACF1-235ENST00000641104 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
MACF1-235ENST00000641104 NESP48681 1621 aa14.33□□□□□ -0.11
MACF1-235ENST00000641104 TTC39AQ5SRH9 613 aa14.33□□□□□ -0.11
MACF1-235ENST00000641104 WDR63Q8IWG1 891 aa14.33□□□□□ -0.11
MACF1-235ENST00000641104 MTMR7Q9Y216 660 aa14.33□□□□□ -0.11
MACF1-235ENST00000641104 MBD3O95983 291 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 EPS15P42566 896 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 CABP4P57796 275 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
MACF1-235ENST00000641104 IFT140Q96RY7 1462 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 RPGRIP1LQ68CZ1 1315 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 TROQ12816 1431 aaPredicted RBP14.33□□□□□ -0.12
MACF1-235ENST00000641104 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 MNS1Q8NEH6 495 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 OFD1O75665 1012 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 TEX35Q5T0J7 233 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 TSR2Q969E8 191 aaKnown RBP14.33□□□□□ -0.12
MACF1-235ENST00000641104 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
MACF1-235ENST00000641104 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
MACF1-235ENST00000641104 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
MACF1-235ENST00000641104 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
MACF1-235ENST00000641104 C1orf115Q9H7X2 142 aa14.32□□□□□ -0.12
MACF1-235ENST00000641104 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
MACF1-235ENST00000641104 MRE11P49959 708 aa14.32□□□□□ -0.12
MACF1-235ENST00000641104 SRCIN1Q9C0H9 1055 aa14.32□□□□□ -0.12
MACF1-235ENST00000641104 ARGLU1Q9NWB6 273 aaPredicted RBP14.32□□□□□ -0.12
MACF1-235ENST00000641104 KINO60870 393 aaKnown RBP14.31□□□□□ -0.12
MACF1-235ENST00000641104 FAM43AQ8N2R8 423 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 CDR1P51861 262 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 ODF2Q5BJF6 829 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 TOM1L2Q6ZVM7 507 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
MACF1-235ENST00000641104 CCDC39Q9UFE4 941 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
MACF1-235ENST00000641104 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
MACF1-235ENST00000641104 ACBD3Q9H3P7 528 aa14.3□□□□□ -0.12
MACF1-235ENST00000641104 TXLNAP40222 546 aa14.3□□□□□ -0.12
MACF1-235ENST00000641104 ATAD2Q6PL18 1390 aa14.3□□□□□ -0.12
MACF1-235ENST00000641104 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
MACF1-235ENST00000641104 PDILTQ8N807 584 aa14.3□□□□□ -0.12
MACF1-235ENST00000641104 ERBINQ96RT1 1412 aa14.3□□□□□ -0.12
MACF1-235ENST00000641104 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 ZNF771Q7L3S4 317 aaPredicted RBP14.29□□□□□ -0.12
MACF1-235ENST00000641104 KDM4AO75164 1064 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 BCAR3O75815 825 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 ATP2B1P20020 1258 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 AK7Q96M32 723 aa14.29□□□□□ -0.12
MACF1-235ENST00000641104 ANKLE2Q86XL3 938 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 ANKRD1Q15327 319 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 ATF7IPQ6VMQ6 1270 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 NACAP1Q9BZK3 213 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 CYP46A1Q9Y6A2 500 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 TRAK2O60296 914 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 CCDC173Q0VFZ6 552 aa14.28□□□□□ -0.12
MACF1-235ENST00000641104 DDX54Q8TDD1 881 aaKnown RBP14.28□□□□□ -0.12
MACF1-235ENST00000641104 STK38Q15208 465 aa14.27□□□□□ -0.12
MACF1-235ENST00000641104 TRIM5Q9C035 493 aa14.27□□□□□ -0.12
MACF1-235ENST00000641104 FAM13BQ9NYF5 915 aa14.27□□□□□ -0.12
MACF1-235ENST00000641104 JMYQ8N9B5 988 aa14.27□□□□□ -0.12
MACF1-235ENST00000641104 RNF214Q8ND24 703 aa14.27□□□□□ -0.12
MACF1-235ENST00000641104 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.12
MACF1-235ENST00000641104 FILIP1LQ4L180 1135 aa14.27□□□□□ -0.13
MACF1-235ENST00000641104 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
MACF1-235ENST00000641104 PIP4K2AP48426 406 aaPredicted RBP14.27□□□□□ -0.13
MACF1-235ENST00000641104 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
MACF1-235ENST00000641104 MVPQ14764 893 aaKnown RBP14.26□□□□□ -0.13
MACF1-235ENST00000641104 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms