RNA–Protein interactions for RNA: ENST00000637911.1

SYNGAP1-225, Transcript of synaptic Ras GTPase activating protein 1, human

TSL 5

Gene SYNGAP1, Length 157 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNGAP1-225	ENST00000637911	AMPD1	P23109	780 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	APLP1	P51693	650 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	HDGF	P51858	240 aa	Known RBP	0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	PUM1	Q14671	1186 aa	Known RBP eCLIP	0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	GPR162	Q16538	588 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ECM1	Q16610	540 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	CDCP2	Q5VXM1	449 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	MRPL14	Q6P1L8	145 aa	Known RBP	0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	NECTIN2	Q92692	538 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	TRIM52	Q96A61	297 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	PRR14	Q9BWN1	585 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	CDCA7	Q9BWT1	371 aa	Predicted RBP	0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	SLC6A16	Q9GZN6	736 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	LRRC4B	Q9NT99	713 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	WASF2	Q9Y6W5	498 aa		0.37	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ONECUT3	O60422	494 aa	Predicted RBP	0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	APBA3	O96018	575 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ADH1B	P00325	375 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ALDH1A1	P00352	501 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	FSHB	P01225	129 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ITGB6	P18564	788 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	RAP1GAP	P47736	663 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ATG9B	Q674R7	924 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	RNF19B	Q6ZMZ0	732 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	LCNL1	Q6ZST4	164 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	SAMD7	Q7Z3H4	446 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	MPND	Q8N594	471 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	TRIM41	Q8WV44	630 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	PTCD2	Q8WV60	388 aa	Known RBP	0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	MRGPRX2	Q96LB1	330 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	SORCS2	Q96PQ0	1159 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	REPIN1	Q9BWE0	567 aa	Known RBP	0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ADGRE2	Q9UHX3	823 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	TRIOBP	Q9H2D6	2365 aa		0.36	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	IGF1R	P08069	1367 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	OIP5	O43482	229 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	TLL1	O43897	1013 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	KRT10	P13645	584 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	INSRR	P14616	1297 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	JUNB	P17275	347 aa	Predicted RBP	0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	CFP	P27918	469 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	INHBC	P55103	352 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	PDAP1	Q13442	181 aa	Known RBP	0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	C6orf118	Q5T5N4	469 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	LRRC56	Q8IYG6	542 aa	Predicted RBP	0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	CCDC155	Q8N6L0	562 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	SLC16A11	Q8NCK7	471 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	TMC2	Q8TDI7	906 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ZDHHC16	Q969W1	377 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ACD	Q96AP0	544 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	NELL2	Q99435	816 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	MRI	Q9BWK5	157 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	ZBTB47	Q9UFB7	747 aa	Predicted RBP	0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	NSFL1C	Q9UNZ2	370 aa	Known RBP	0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	PCDHB3	Q9Y5E6	796 aa		0.35	□□□□□ -2.35
SYNGAP1-225	ENST00000637911	CYSRT1	A8MQ03	144 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	KRTAP9-6	A8MVA2	160 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	GRIN3B	O60391	1043 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	LILRB3	O75022	631 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	UPP2	O95045	317 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	WNT11	O96014	354 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ERBB2	P04626	1255 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	SPATA31C1	P0DKV0	1188 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ATXN8OS	P0DMR3	200 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	HOXA5	P20719	270 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ITGA6	P23229	1130 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	NUBP1	P53384	320 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	FOSB	P53539	338 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ZXDA	P98168	799 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	NFKB2	Q00653	900 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	PTS	Q03393	145 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	LRCH2	Q5VUJ6	765 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ERICH6B	Q5W0A0	696 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	FOXR1	Q6PIV2	292 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	LINC00114	Q6XXX2	140 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ADAM33	Q9BZ11	813 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	MBIP	Q9NS73	344 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	IGSF5	Q9NSI5	407 aa		0.34	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	KIF3C	O14782	793 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	BMP2	P12643	396 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	SLC4A3	P48751	1232 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	PRRT3	Q5FWE3	981 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	BLOC1S3	Q6QNY0	202 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	GIGYF2	Q6Y7W6	1299 aa	Known RBP	0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	KRTAP5-5	Q701N2	237 aa	Predicted RBP	0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	PACS2	Q86VP3	889 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	ANKLE2	Q86XL3	938 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	TP53INP1	Q96A56	240 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	NACC1	Q96RE7	527 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	GPR20	Q99678	358 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	UNKL	Q9H9P5	680 aa	Known RBP	0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	FAM53C	Q9NYF3	392 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	MYRF	Q9Y2G1	1151 aa		0.33	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	SPDYE3	A6NKU9	549 aa		0.32	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	TRIM6-TRIM34	B2RNG4	842 aa		0.32	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	CELA3B	P08861	270 aa		0.32	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	GRN	P28799	593 aa	Known RBP	0.32	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	GRIK1	P39086	918 aa		0.32	□□□□□ -2.36
SYNGAP1-225	ENST00000637911	KRTAP10-2	P60368	255 aa		0.32	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms