RNA–Protein interactions for RNA: ENST00000637679.1

NRXN1-262, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-262	ENST00000637679	LCHN	A4D1U4	455 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	SHOX2	O60902	331 aa	Predicted RBP	0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	DCAF8L2	P0C7V8	631 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	RARA	P10276	462 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	SOX10	P56693	466 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	SRSF1	Q07955	248 aa	Known RBP eCLIP	0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	AIDA	Q96BJ3	306 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	LRFN3	Q9BTN0	628 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	MCOLN1	Q9GZU1	580 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	WBP1L	Q9NX94	342 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	CUBN	O60494	3623 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	UTP20	O75691	2785 aa	Known RBP	0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	NBEAL1	Q6ZS30	2694 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	MARF1	Q9Y4F3	1742 aa	Known RBP	0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	DMD	P11532	3685 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	ARAP3	Q8WWN8	1544 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	LRRK2	Q5S007	2527 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	PLXNA3	P51805	1871 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	FAT4	Q6V0I7	4981 aa		0.63	□□□□□ -2.31
NRXN1-262	ENST00000637679	CEP170	Q5SW79	1584 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	NF1	P21359	2839 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	HERC1	Q15751	4861 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	IFT140	Q96RY7	1462 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	WDR7	Q9Y4E6	1490 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	TLN1	Q9Y490	2541 aa	Known RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	WIPF1	O43516	503 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	BAG6	P46379	1132 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	SF3B2	Q13435	895 aa	Known RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	NFATC2IP	Q8NCF5	419 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	FHDC1	Q9C0D6	1143 aa	Predicted RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	KCNH6	Q9H252	994 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	SENP3	Q9H4L4	574 aa	Predicted RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	KIF14	Q15058	1648 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	FRYL	O94915	3013 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	ADGRB3	O60242	1522 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	DISP1	Q96F81	1524 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	RGPD3	A6NKT7	1758 aa	Predicted RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	RGPD4	Q7Z3J3	1758 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	PAPPA2	Q9BXP8	1791 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	CNOT1	A5YKK6	2376 aa	Known RBP	0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	COL4A5	P29400	1685 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	AFF2	P51816	1311 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	ADGRB2	O60241	1585 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	ABCA8	O94911	1581 aa		0.62	□□□□□ -2.31
NRXN1-262	ENST00000637679	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	RAPGEF2	Q9Y4G8	1499 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	MYO16	Q9Y6X6	1858 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	KIDINS220	Q9ULH0	1771 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	GPATCH8	Q9UKJ3	1502 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	MACF1	Q9UPN3	7388 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	BHMG1	C9JSJ3	638 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	MAP3K13	O43283	966 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	SYNCRIP	O60506	623 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	LUC7L3	O95232	432 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	SIX3	O95343	332 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	POU3F2	P20265	443 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	ID4	P47928	161 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	TJAP1	Q5JTD0	557 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	HIST2H2BC	Q6DN03	193 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	HIST2H2BD	Q6DRA6	164 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	ANKRD24	Q8TF21	1146 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	ZNF526	Q8TF50	670 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	EMID1	Q96A84	441 aa	Predicted RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	RUNDC1	Q96C34	613 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	FBXL18	Q96ME1	805 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	PRO3102	Q9H379	93 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	QTRT2	Q9H974	415 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	NEB	P20929	6669 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	ZC3H13	Q5T200	1668 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	PRAG1	Q86YV5	1406 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	FLNA	P21333	2647 aa	Known RBP	0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	PKD1L3	Q7Z443	1732 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	ZFYVE26	Q68DK2	2539 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	OTOG	Q6ZRI0	2925 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	CSMD2	Q7Z408	3487 aa		0.61	□□□□□ -2.31
NRXN1-262	ENST00000637679	PARD3	Q8TEW0	1356 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	SYNE2	Q8WXH0	6885 aa	Known RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	DICER1	Q9UPY3	1922 aa	Known RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	ARHGEF12	Q9NZN5	1544 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679		A0A1W2PPC1	479 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	GRIN3B	O60391	1043 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	GPR37L1	O60883	481 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	HOXA10	P31260	410 aa	Predicted RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	PTGER2	P43116	358 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	POU4F1	Q01851	419 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	PKD2	Q13563	968 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	LRRC41	Q15345	812 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	GPR162	Q16538	588 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	MEX3C	Q5U5Q3	659 aa	Known RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	POTED	Q86YR6	584 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	CNKSR2	Q8WXI2	1034 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	POM121	Q96HA1	1249 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	REPIN1	Q9BWE0	567 aa	Known RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	RBM27	Q9P2N5	1060 aa	Known RBP	0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	ABCC5	O15440	1437 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	CRB1	P82279	1406 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	GVINP1	Q7Z2Y8	2422 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	SSC5D	A1L4H1	1573 aa		0.6	□□□□□ -2.31
NRXN1-262	ENST00000637679	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	0.6	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms