RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 HMMRO75330 724 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 UQCRHP07919 91 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 HSP90AB1P08238 724 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 VDRP11473 427 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 FLT3P36888 993 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 NOP2P46087 812 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 HDLBPQ00341 1268 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 KCNA1Q09470 495 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 BIRC2Q13490 618 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 HS1BP3Q53T59 392 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 JAKMIP3Q5VZ66 844 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 AMOTL1Q8IY63 956 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCDC82Q8N4S0 544 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 EVI5LQ96CN4 794 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 FEZ1Q99689 392 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 ARPC5LQ9BPX5 153 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 DEF6Q9H4E7 631 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 UTP6Q9NYH9 597 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 CWC15Q9P013 229 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 SUN2Q9UH99 717 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 PRDM2Q13029 1718 aa3.12□□□□□ -1.91
SYNGAP1-221ENST00000637490 BICDL2A1A5D9 508 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 UNCXA6NJT0 531 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 IPO5O00410 1097 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 KIF5CO60282 957 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 PPFIA2O75334 1257 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 PEX14O75381 377 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 STK10O94804 968 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 MS4A1P11836 297 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 APLP1P51693 650 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCT2P78371 535 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 IRX1P78414 480 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 PKD2Q13563 968 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SF3A1Q15459 793 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 ZSCAN26Q16670 478 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 FILIP1LQ4L180 1135 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 AMOTQ4VCS5 1084 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SASS6Q6UVJ0 657 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 ANKRD13BQ86YJ7 626 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SAMD3Q8N6K7 520 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 FAM184AQ8NB25 1140 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 PIK3R5Q8WYR1 880 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SYAP1Q96A49 352 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 AGAP3Q96P47 875 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 NOL10Q9BSC4 688 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 POLR3CQ9BUI4 534 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 TPX2Q9ULW0 747 aaKnown RBP3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SUFUQ9UMX1 484 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 SMARCA2P51531 1590 aa3.11□□□□□ -1.91
SYNGAP1-221ENST00000637490 MAP4K4O95819 1239 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 NBPF7P0C2Y1 421 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 NAT1P18440 290 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 PAX3P23760 479 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 MSNP26038 577 aaKnown RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 MCM5P33992 734 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 ATP6V1AP38606 617 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 GSCP56915 257 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 POU5F1Q01860 360 aaKnown RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 TRAF1Q13077 416 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 IFT88Q13099 833 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 TMED1Q13445 227 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 RASA3Q14644 834 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 CCDC73Q6ZRK6 1079 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 BARGINQ6ZT62 677 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 ZSCAN30Q86W11 494 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 NLRP13Q86W25 1043 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 FMNL3Q8IVF7 1028 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 PDCL2Q8N4E4 241 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 PNISRQ8TF01 805 aaKnown RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 RMDN2Q96LZ7 410 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 DRC1Q96MC2 740 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 AGBL1Q96MI9 1066 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 ZNF396Q96N95 335 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 LZTS2Q9BRK4 669 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 C22orf23Q9BZE7 217 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 RASSF4Q9H2L5 321 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 CXorf56Q9H5V9 222 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 UPF2Q9HAU5 1272 aaKnown RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 GPBP1L1Q9HC44 474 aaPredicted RBP3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 IGSF5Q9NSI5 407 aa3.1□□□□□ -1.91
SYNGAP1-221ENST00000637490 TMCO5BA8MYB1 307 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 HTATSF1O43719 755 aaKnown RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 RAB11FIP3O75154 756 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 WDHD1O75717 1129 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 SKILP12757 684 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 XRCC6P12956 609 aaKnown RBP eCLIP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 BDNFP23560 247 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 TRPC1P48995 793 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 GYS2P54840 703 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 EIF5P55010 431 aaKnown RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 CHAF1AQ13111 956 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 BECN1Q14457 450 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 MCM6Q14566 821 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 PDCD2Q16342 344 aaPredicted RBP3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 TSNAXIP1Q2TAA8 658 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 MAP9Q49MG5 647 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 WWC2Q6AWC2 1192 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 FILIP1Q7Z7B0 1213 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 CATIPQ7Z7H3 387 aa3.09□□□□□ -1.91
SYNGAP1-221ENST00000637490 IQCF2Q8IXL9 164 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms