RNA–Protein interactions for RNA: ENST00000636850.1

CHRNA7-220, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 916 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-220ENST00000636850 FNBP4Q8N3X1 1017 aaPredicted RBP29.23■■■□□ 2.27
CHRNA7-220ENST00000636850 USP21Q9UK80 565 aa29.23■■■□□ 2.27
CHRNA7-220ENST00000636850 PHRF1Q9P1Y6 1649 aaKnown RBP29.23■■■□□ 2.27
CHRNA7-220ENST00000636850 RXRBP28702 533 aa29.22■■■□□ 2.27
CHRNA7-220ENST00000636850 NWD2Q9ULI1 1742 aa29.22■■■□□ 2.27
CHRNA7-220ENST00000636850 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.26
CHRNA7-220ENST00000636850 CDK12Q9NYV4 1490 aaPredicted RBP29.2■■■□□ 2.26
CHRNA7-220ENST00000636850 AKAP12Q02952 1782 aa29.2■■■□□ 2.26
CHRNA7-220ENST00000636850 BCL9LQ86UU0 1499 aa29.18■■■□□ 2.26
CHRNA7-220ENST00000636850 SLIT2O94813 1529 aa29.18■■■□□ 2.26
CHRNA7-220ENST00000636850 ATRNO75882 1429 aa29.18■■■□□ 2.26
CHRNA7-220ENST00000636850 TRPC5Q9UL62 973 aaPredicted RBP29.16■■■□□ 2.26
CHRNA7-220ENST00000636850 ATAD2Q6PL18 1390 aa29.15■■■□□ 2.26
CHRNA7-220ENST00000636850 RBM6P78332 1123 aaKnown RBP29.15■■■□□ 2.26
CHRNA7-220ENST00000636850 CABP1Q9NZU7 370 aa29.15■■■□□ 2.26
CHRNA7-220ENST00000636850 COL14A1Q05707 1796 aaKnown RBP29.15■■■□□ 2.26
CHRNA7-220ENST00000636850 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
CHRNA7-220ENST00000636850 TIMELESSQ9UNS1 1208 aa29.14■■■□□ 2.26
CHRNA7-220ENST00000636850 RGS12O14924 1447 aa29.13■■■□□ 2.25
CHRNA7-220ENST00000636850 USP6P35125 1406 aa29.13■■■□□ 2.25
CHRNA7-220ENST00000636850 NRAPQ86VF7 1730 aa29.12■■■□□ 2.25
CHRNA7-220ENST00000636850 NRKQ7Z2Y5 1582 aa29.11■■■□□ 2.25
CHRNA7-220ENST00000636850 BRD4O60885 1362 aaPredicted RBP29.11■■■□□ 2.25
CHRNA7-220ENST00000636850 MON2Q7Z3U7 1717 aa29.11■■■□□ 2.25
CHRNA7-220ENST00000636850 PIK3C2AO00443 1686 aa29.09■■■□□ 2.25
CHRNA7-220ENST00000636850 NUTM2GQ5VZR2 741 aa29.08■■■□□ 2.25
CHRNA7-220ENST00000636850 UNC5CLQ8IV45 518 aa29.08■■■□□ 2.25
CHRNA7-220ENST00000636850 ABTB2Q8N961 1025 aa29.07■■■□□ 2.24
CHRNA7-220ENST00000636850 USP47Q96K76 1375 aa29.07■■■□□ 2.24
CHRNA7-220ENST00000636850 GLI3P10071 1580 aa29.06■■■□□ 2.24
CHRNA7-220ENST00000636850 ST20-MTHFSA0A0A6YYL1 179 aa29.05■■■□□ 2.24
CHRNA7-220ENST00000636850 FAM83GA6ND36 823 aa29.04■■■□□ 2.24
CHRNA7-220ENST00000636850 SSH2Q76I76 1423 aa29.03■■■□□ 2.24
CHRNA7-220ENST00000636850 CPSF1Q10570 1443 aaKnown RBP29.03■■■□□ 2.24
CHRNA7-220ENST00000636850 USP19O94966 1318 aa29.02■■■□□ 2.24
CHRNA7-220ENST00000636850 TESK2Q96S53 571 aa29.02■■■□□ 2.24
CHRNA7-220ENST00000636850 GJD4Q96KN9 370 aaPredicted RBP29.01■■■□□ 2.23
CHRNA7-220ENST00000636850 PRDM11Q9NQV5 511 aa29.01■■■□□ 2.23
CHRNA7-220ENST00000636850 KIAA0232Q92628 1395 aa29.01■■■□□ 2.23
CHRNA7-220ENST00000636850 KTN1Q86UP2 1357 aaKnown RBP28.99■■■□□ 2.23
CHRNA7-220ENST00000636850 NLRP13Q86W25 1043 aa28.98■■■□□ 2.23
CHRNA7-220ENST00000636850 ZNF692Q9BU19 519 aaPredicted RBP28.98■■■□□ 2.23
CHRNA7-220ENST00000636850 SLIT3O75094 1523 aa28.98■■■□□ 2.23
CHRNA7-220ENST00000636850 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
CHRNA7-220ENST00000636850 BTG4Q9NY30 223 aa28.97■■■□□ 2.23
CHRNA7-220ENST00000636850 VPS72Q15906 364 aa28.96■■■□□ 2.23
CHRNA7-220ENST00000636850 TMC1Q8TDI8 760 aa28.96■■■□□ 2.23
CHRNA7-220ENST00000636850 BRWD3Q6RI45 1802 aa28.95■■■□□ 2.23
CHRNA7-220ENST00000636850 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
CHRNA7-220ENST00000636850 PUS7Q96PZ0 661 aaKnown RBP28.95■■■□□ 2.22
CHRNA7-220ENST00000636850 LMO7Q8WWI1 1683 aa28.95■■■□□ 2.22
CHRNA7-220ENST00000636850 ZC3H6P61129 1189 aaKnown RBP28.94■■■□□ 2.22
CHRNA7-220ENST00000636850 CCDC9Q9Y3X0 531 aaKnown RBP28.94■■■□□ 2.22
CHRNA7-220ENST00000636850 TTC21BQ7Z4L5 1316 aa28.94■■■□□ 2.22
CHRNA7-220ENST00000636850 CPDO75976 1380 aa28.93■■■□□ 2.22
CHRNA7-220ENST00000636850 NLRP6P59044 892 aa28.93■■■□□ 2.22
CHRNA7-220ENST00000636850 TTC21AQ8NDW8 1320 aa28.93■■■□□ 2.22
CHRNA7-220ENST00000636850 USP54Q70EL1 1684 aa28.93■■■□□ 2.22
CHRNA7-220ENST00000636850 CHRNA2Q15822 529 aa28.92■■■□□ 2.22
CHRNA7-220ENST00000636850 NINLQ9Y2I6 1382 aa28.91■■■□□ 2.22
CHRNA7-220ENST00000636850 SLC12A5Q9H2X9 1139 aa28.9■■■□□ 2.22
CHRNA7-220ENST00000636850 A0A1W2PP64 1363 aa28.89■■■□□ 2.22
CHRNA7-220ENST00000636850 GCP02774 474 aa28.89■■■□□ 2.22
CHRNA7-220ENST00000636850 HDGFL2Q7Z4V5 671 aaPredicted RBP28.89■■■□□ 2.22
CHRNA7-220ENST00000636850 TMF1P82094 1093 aa28.88■■■□□ 2.21
CHRNA7-220ENST00000636850 EDC4Q6P2E9 1401 aaKnown RBP28.87■■■□□ 2.21
CHRNA7-220ENST00000636850 TERF2IPQ9NYB0 399 aa28.87■■■□□ 2.21
CHRNA7-220ENST00000636850 CAMTA1Q9Y6Y1 1673 aa28.86■■■□□ 2.21
CHRNA7-220ENST00000636850 UPF1Q92900 1129 aaKnown RBP eCLIP28.85■■■□□ 2.21
CHRNA7-220ENST00000636850 EP400Q96L91 3159 aa28.85■■■□□ 2.21
CHRNA7-220ENST00000636850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.84■■■□□ 2.21
CHRNA7-220ENST00000636850 MYOM1P52179 1685 aa28.83■■■□□ 2.21
CHRNA7-220ENST00000636850 COL18A1P39060 1754 aa28.83■■■□□ 2.21
CHRNA7-220ENST00000636850 STRN4Q9NRL3 753 aa28.83■■■□□ 2.21
CHRNA7-220ENST00000636850 NFAT5O94916 1531 aa28.83■■■□□ 2.21
CHRNA7-220ENST00000636850 SPATA31A5Q5VU36 1347 aa28.82■■■□□ 2.2
CHRNA7-220ENST00000636850 SPATA31A7Q8IWB4 1347 aa28.82■■■□□ 2.2
CHRNA7-220ENST00000636850 RGPD5Q99666 1765 aa28.82■■■□□ 2.2
CHRNA7-220ENST00000636850 THSD7AQ9UPZ6 1657 aa28.81■■■□□ 2.2
CHRNA7-220ENST00000636850 LTN1O94822 1766 aa28.8■■■□□ 2.2
CHRNA7-220ENST00000636850 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
CHRNA7-220ENST00000636850 COL5A2P05997 1499 aaPredicted RBP28.79■■■□□ 2.2
CHRNA7-220ENST00000636850 USP31Q70CQ4 1352 aa28.79■■■□□ 2.2
CHRNA7-220ENST00000636850 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
CHRNA7-220ENST00000636850 NME9Q86XW9 330 aa28.79■■■□□ 2.2
CHRNA7-220ENST00000636850 SEPT12Q8IYM1 358 aa28.79■■■□□ 2.2
CHRNA7-220ENST00000636850 ANKRD36BQ8N2N9 1353 aa28.78■■■□□ 2.2
CHRNA7-220ENST00000636850 A0A0G2JS52 829 aa28.78■■■□□ 2.2
CHRNA7-220ENST00000636850 MYT1Q01538 1121 aa28.78■■■□□ 2.2
CHRNA7-220ENST00000636850 FAM98CQ17RN3 349 aaKnown RBP28.78■■■□□ 2.2
CHRNA7-220ENST00000636850 KCNH5Q8NCM2 988 aa28.78■■■□□ 2.2
CHRNA7-220ENST00000636850 AATKQ6ZMQ8 1374 aa28.77■■■□□ 2.2
CHRNA7-220ENST00000636850 SOX12O15370 315 aa28.77■■■□□ 2.2
CHRNA7-220ENST00000636850 ONECUT3O60422 494 aaPredicted RBP28.77■■■□□ 2.2
CHRNA7-220ENST00000636850 EVA1CP58658 441 aa28.77■■■□□ 2.2
CHRNA7-220ENST00000636850 SPATA31A1Q5TZJ5 1347 aa28.76■■■□□ 2.19
CHRNA7-220ENST00000636850 ZRANB1Q9UGI0 708 aa28.76■■■□□ 2.19
CHRNA7-220ENST00000636850 KIF20BQ96Q89 1820 aa28.74■■■□□ 2.19
CHRNA7-220ENST00000636850 OVOS2A0A0J9YW53 1432 aa28.74■■■□□ 2.19
CHRNA7-220ENST00000636850 OVOS2Q6IE36 1432 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms