RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 PLCD4Q9BRC7 762 aa7.25□□□□□ -1.25
SCN2A-213ENST00000636769 CRACR2AQ9BSW2 395 aa7.25□□□□□ -1.25
SCN2A-213ENST00000636769 SMTNL1A8MU46 457 aa7.25□□□□□ -1.25
SCN2A-213ENST00000636769 ZSCAN31Q96LW9 406 aaPredicted RBP7.25□□□□□ -1.25
SCN2A-213ENST00000636769 XBP1P17861 261 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 ANKRD18AQ8IVF6 992 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 PLEKHH1Q9ULM0 1364 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 FIBPO43427 364 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 NOL10Q9BSC4 688 aaKnown RBP7.24□□□□□ -1.25
SCN2A-213ENST00000636769 EIF4G1Q04637 1599 aaKnown RBP7.24□□□□□ -1.25
SCN2A-213ENST00000636769 CNTROBQ8N137 903 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 NUP62CLQ9H1M0 184 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 NCAPD3P42695 1498 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 GOLGA6L10A0A0M3HER8 536 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 SERPINC1P01008 464 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 PPP4R3BQ5MIZ7 849 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 BRMS1Q9HCU9 246 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 PANK1Q8TE04 598 aa7.24□□□□□ -1.25
SCN2A-213ENST00000636769 GTF2A1P52655 376 aaPredicted RBP7.24□□□□□ -1.25
SCN2A-213ENST00000636769 ZHX1Q9UKY1 873 aaPredicted RBP7.24□□□□□ -1.25
SCN2A-213ENST00000636769 PRDM10Q9NQV6 1147 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 CCDC94Q9BW85 323 aaPredicted RBP7.23□□□□□ -1.25
SCN2A-213ENST00000636769 CFAP45Q9UL16 551 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 GOLGA6L9A6NEM1 432 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 CCDC181Q5TID7 509 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 LUZP1Q86V48 1076 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 DHX29Q7Z478 1369 aaKnown RBP7.23□□□□□ -1.25
SCN2A-213ENST00000636769 SFPQP23246 707 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCN2A-213ENST00000636769 TERF1P54274 439 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 MAP3K11Q16584 847 aa7.23□□□□□ -1.25
SCN2A-213ENST00000636769 G3BP1Q13283 466 aaKnown RBP eCLIP7.23□□□□□ -1.25
SCN2A-213ENST00000636769 GNAI3P08754 354 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 MAGEC2Q9UBF1 373 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-213ENST00000636769 PPP6R1Q9UPN7 881 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 GSDMDP57764 484 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 CCDC183Q5T5S1 534 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 CCDC148Q8NFR7 591 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 FEZ1Q99689 392 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 EVC2Q86UK5 1308 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 DIAPH1O60610 1272 aaKnown RBP7.22□□□□□ -1.25
SCN2A-213ENST00000636769 STK38Q15208 465 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 CT47A1Q5JQC4 288 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-213ENST00000636769 RALYLQ86SE5 291 aaKnown RBP7.22□□□□□ -1.25
SCN2A-213ENST00000636769 LMOD2Q6P5Q4 547 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 ERICH2A1L162 156 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 SLC26A8Q96RN1 970 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 SCAPERQ9BY12 1400 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 XPCQ01831 940 aaPredicted RBP7.22□□□□□ -1.25
SCN2A-213ENST00000636769 ZNF428Q96B54 188 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 AKNAQ7Z591 1439 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 RIPK4P57078 832 aa7.22□□□□□ -1.25
SCN2A-213ENST00000636769 EZRP15311 586 aaKnown RBP7.21□□□□□ -1.25
SCN2A-213ENST00000636769 KLHL40Q2TBA0 621 aa7.21□□□□□ -1.25
SCN2A-213ENST00000636769 JAKMIP3Q5VZ66 844 aa7.21□□□□□ -1.25
SCN2A-213ENST00000636769 DNAAF4Q8WXU2 420 aa7.21□□□□□ -1.25
SCN2A-213ENST00000636769 UPF3BQ9BZI7 483 aaKnown RBP7.21□□□□□ -1.25
SCN2A-213ENST00000636769 RBM33Q96EV2 1170 aaKnown RBP7.21□□□□□ -1.25
SCN2A-213ENST00000636769 CCDC83Q8IWF9 413 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 TXLNAP40222 546 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 HSP90AB2PQ58FF8 381 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 C9orf78Q9NZ63 289 aaPredicted RBP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 DNAJC5BQ9UF47 199 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 DDX58O95786 925 aaKnown RBP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 GTF2F1P35269 517 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 TUBB4BP68371 445 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 SAFB2Q14151 953 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.21□□□□□ -1.26
SCN2A-213ENST00000636769 SRCIN1Q9C0H9 1055 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 CENPHQ9H3R5 247 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 CYP46A1Q9Y6A2 500 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 ARHGAP29Q52LW3 1261 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 SYCE3A1L190 88 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 KIAA1328Q86T90 577 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 AMOTL1Q8IY63 956 aa7.21□□□□□ -1.26
SCN2A-213ENST00000636769 TNNT1P13805 278 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 EFCAB2Q5VUJ9 269 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 PLEKHH2Q8IVE3 1493 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 ODF2Q5BJF6 829 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 PNISRQ8TF01 805 aaKnown RBP7.2□□□□□ -1.26
SCN2A-213ENST00000636769 PRM3Q9NNZ6 103 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 CTAGE5O15320 804 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 GPATCH11Q8N954 259 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 NF2P35240 595 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 EPS15P42566 896 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 NFXL1Q6ZNB6 911 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 SCAND2PQ9GZW5 306 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-213ENST00000636769 CCDC171Q6TFL3 1326 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 SSR1P43307 286 aaKnown RBP7.2□□□□□ -1.26
SCN2A-213ENST00000636769 MNAT1P51948 309 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 STIM1Q13586 685 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 SMARCC1Q92922 1105 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-213ENST00000636769 FBXW7Q969H0 707 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 SPATA32Q96LK8 384 aa7.2□□□□□ -1.26
SCN2A-213ENST00000636769 ELL2O00472 640 aaPredicted RBP7.2□□□□□ -1.26
SCN2A-213ENST00000636769 PLPPR3Q6T4P5 718 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
SCN2A-213ENST00000636769 IMMTQ16891 758 aaKnown RBP7.19□□□□□ -1.26
SCN2A-213ENST00000636769 WDR63Q8IWG1 891 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms