RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ANKRD26Q9UPS8 1709 aa14.61□□□□□ -0.07
CLN5-213ENST00000636681 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 TTC21BQ7Z4L5 1316 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 FYB1O15117 783 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 PLEKHG5O94827 1062 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 FBLN1P23142 703 aa14.6□□□□□ -0.07
CLN5-213ENST00000636681 EDC4Q6P2E9 1401 aaKnown RBP14.6□□□□□ -0.07
CLN5-213ENST00000636681 NHSL1Q5SYE7 1610 aa14.59□□□□□ -0.07
CLN5-213ENST00000636681 PSME1Q06323 249 aa14.59□□□□□ -0.07
CLN5-213ENST00000636681 UBAP1LF5GYI3 381 aa14.58□□□□□ -0.08
CLN5-213ENST00000636681 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
CLN5-213ENST00000636681 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
CLN5-213ENST00000636681 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
CLN5-213ENST00000636681 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
CLN5-213ENST00000636681 PRKRIP1Q9H875 184 aaPredicted RBP14.57□□□□□ -0.08
CLN5-213ENST00000636681 PXDNQ92626 1479 aa14.57□□□□□ -0.08
CLN5-213ENST00000636681 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
CLN5-213ENST00000636681 ZNF692Q9BU19 519 aaPredicted RBP14.57□□□□□ -0.08
CLN5-213ENST00000636681 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
CLN5-213ENST00000636681 CGNL1Q0VF96 1302 aa14.56□□□□□ -0.08
CLN5-213ENST00000636681 MAP2P11137 1827 aaKnown RBP14.55□□□□□ -0.08
CLN5-213ENST00000636681 ANP32CO43423 234 aa14.55□□□□□ -0.08
CLN5-213ENST00000636681 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
CLN5-213ENST00000636681 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
CLN5-213ENST00000636681 SOX12O15370 315 aa14.53□□□□□ -0.08
CLN5-213ENST00000636681 PHLPP1O60346 1717 aa14.53□□□□□ -0.08
CLN5-213ENST00000636681 TOM1O60784 492 aa14.53□□□□□ -0.08
CLN5-213ENST00000636681 ABTB2Q8N961 1025 aa14.52□□□□□ -0.08
CLN5-213ENST00000636681 IQSEC2Q5JU85 1478 aa14.52□□□□□ -0.08
CLN5-213ENST00000636681 NPHP3Q7Z494 1330 aa14.52□□□□□ -0.08
CLN5-213ENST00000636681 MORC1Q86VD1 984 aa14.52□□□□□ -0.09
CLN5-213ENST00000636681 NPC1L1Q9UHC9 1359 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 OVOS2A0A0J9YW53 1432 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 OVOS2Q6IE36 1432 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 NLRP6P59044 892 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 POTEDQ86YR6 584 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 SOS2Q07890 1332 aaPredicted RBP14.51□□□□□ -0.09
CLN5-213ENST00000636681 USP54Q70EL1 1684 aa14.51□□□□□ -0.09
CLN5-213ENST00000636681 CRYBG1Q9Y4K1 1723 aa14.5□□□□□ -0.09
CLN5-213ENST00000636681 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
CLN5-213ENST00000636681 MED1Q15648 1581 aaPredicted RBP14.5□□□□□ -0.09
CLN5-213ENST00000636681 TTC21AQ8NDW8 1320 aa14.5□□□□□ -0.09
CLN5-213ENST00000636681 AHDC1Q5TGY3 1603 aaPredicted RBP14.5□□□□□ -0.09
CLN5-213ENST00000636681 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
CLN5-213ENST00000636681 PPP2R1AP30153 589 aa14.49□□□□□ -0.09
CLN5-213ENST00000636681 TNS3Q68CZ2 1445 aa14.49□□□□□ -0.09
CLN5-213ENST00000636681 LTN1O94822 1766 aa14.48□□□□□ -0.09
CLN5-213ENST00000636681 COG3Q96JB2 828 aa14.48□□□□□ -0.09
CLN5-213ENST00000636681 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
CLN5-213ENST00000636681 PHRF1Q9P1Y6 1649 aaKnown RBP14.48□□□□□ -0.09
CLN5-213ENST00000636681 PEAK1Q9H792 1746 aa14.48□□□□□ -0.09
CLN5-213ENST00000636681 RRS1Q15050 365 aaKnown RBP14.47□□□□□ -0.09
CLN5-213ENST00000636681 NSD2O96028 1365 aa14.47□□□□□ -0.09
CLN5-213ENST00000636681 ABCA3Q99758 1704 aa14.47□□□□□ -0.09
CLN5-213ENST00000636681 SBNO1A3KN83 1393 aa14.47□□□□□ -0.09
CLN5-213ENST00000636681 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
CLN5-213ENST00000636681 RALBP1Q15311 655 aa14.47□□□□□ -0.09
CLN5-213ENST00000636681 RGPD5Q99666 1765 aa14.46□□□□□ -0.09
CLN5-213ENST00000636681 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.09
CLN5-213ENST00000636681 EMILIN1Q9Y6C2 1016 aa14.46□□□□□ -0.09
CLN5-213ENST00000636681 NFAT5O94916 1531 aa14.44□□□□□ -0.1
CLN5-213ENST00000636681 BRD4O60885 1362 aaPredicted RBP14.44□□□□□ -0.1
CLN5-213ENST00000636681 MTHFSP49914 203 aa14.44□□□□□ -0.1
CLN5-213ENST00000636681 SLIT3O75094 1523 aa14.44□□□□□ -0.1
CLN5-213ENST00000636681 ZBTB7CA1YPR0 619 aa14.43□□□□□ -0.1
CLN5-213ENST00000636681 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
CLN5-213ENST00000636681 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
CLN5-213ENST00000636681 USP19O94966 1318 aa14.43□□□□□ -0.1
CLN5-213ENST00000636681 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
CLN5-213ENST00000636681 HSPA1LP34931 641 aa14.42□□□□□ -0.1
CLN5-213ENST00000636681 MRS2Q9HD23 443 aa14.42□□□□□ -0.1
CLN5-213ENST00000636681 SHPRHQ149N8 1683 aa14.41□□□□□ -0.1
CLN5-213ENST00000636681 ZC3H6P61129 1189 aaKnown RBP14.41□□□□□ -0.1
CLN5-213ENST00000636681 PNPLA6Q8IY17 1366 aa14.41□□□□□ -0.1
CLN5-213ENST00000636681 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
CLN5-213ENST00000636681 GCP02774 474 aa14.4□□□□□ -0.1
CLN5-213ENST00000636681 RGPD2P0DJD1 1756 aa14.4□□□□□ -0.1
CLN5-213ENST00000636681 LRRC59Q96AG4 307 aaKnown RBP14.39□□□□□ -0.11
CLN5-213ENST00000636681 COL22A1Q8NFW1 1626 aaPredicted RBP14.39□□□□□ -0.11
CLN5-213ENST00000636681 ARHGEF10O15013 1369 aa14.39□□□□□ -0.11
CLN5-213ENST00000636681 SENP3-EIF4A1A0A087X0R7 540 aa14.39□□□□□ -0.11
CLN5-213ENST00000636681 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
CLN5-213ENST00000636681 CCER2I3L3R5 266 aa14.38□□□□□ -0.11
CLN5-213ENST00000636681 AATKQ6ZMQ8 1374 aa14.38□□□□□ -0.11
CLN5-213ENST00000636681 COL18A1P39060 1754 aa14.38□□□□□ -0.11
CLN5-213ENST00000636681 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
CLN5-213ENST00000636681 HSP90AB2PQ58FF8 381 aa14.37□□□□□ -0.11
CLN5-213ENST00000636681 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
CLN5-213ENST00000636681 FAM9BQ8IZU0 186 aa14.36□□□□□ -0.11
CLN5-213ENST00000636681 AXIN2Q9Y2T1 843 aa14.36□□□□□ -0.11
CLN5-213ENST00000636681 KIAA0232Q92628 1395 aa14.35□□□□□ -0.11
CLN5-213ENST00000636681 NUTM2BA6NNL0 878 aaPredicted RBP14.35□□□□□ -0.11
CLN5-213ENST00000636681 NUTM2EB1AL46 878 aaPredicted RBP14.35□□□□□ -0.11
CLN5-213ENST00000636681 ARHGEF25Q86VW2 580 aa14.35□□□□□ -0.11
CLN5-213ENST00000636681 NUTM2AQ8IVF1 878 aaPredicted RBP14.35□□□□□ -0.11
CLN5-213ENST00000636681 HOXC9P31274 260 aa14.34□□□□□ -0.11
CLN5-213ENST00000636681 AMPHP49418 695 aa14.34□□□□□ -0.11
CLN5-213ENST00000636681 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
CLN5-213ENST00000636681 PNISRQ8TF01 805 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms