RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 SLC4A2P04920 1241 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 CNTROBQ8N137 903 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 PEG3Q9GZU2 1588 aa9.4□□□□□ -0.9
SMARCA2-252ENST00000636559 WDR63Q8IWG1 891 aa9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 BECN2A8MW95 431 aa9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 RRS1Q15050 365 aaKnown RBP9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 RALYLQ86SE5 291 aaKnown RBP9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 NUDT16Q96DE0 195 aaKnown RBP9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 SMC3Q9UQE7 1217 aa9.4□□□□□ -0.91
SMARCA2-252ENST00000636559 FAM177BA6PVY3 158 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 PDE3AQ14432 1141 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 CCDC61Q9Y6R9 512 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 GNAI2P04899 355 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 DDX54Q8TDD1 881 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 CHMP5Q9NZZ3 219 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 MAP3K1Q13233 1512 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 FSD1Q9BTV5 496 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 TCEAL9Q9UHQ7 104 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
SMARCA2-252ENST00000636559 TPM3P06753 285 aa9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 KLHL34Q8N239 644 aa9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 VPS37CA5D8V6 355 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 PRDM11Q9NQV5 511 aa9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 CT47B1P0C2W7 299 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 ZNF608Q9ULD9 1512 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 BIVM-ERCC5R4GMW8 1640 aa9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 AKNAQ7Z591 1439 aa9.38□□□□□ -0.91
SMARCA2-252ENST00000636559 C1orf115Q9H7X2 142 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 FYB1O15117 783 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 BCAR3O75815 825 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 TPM2P07951 284 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 CCT4P50991 539 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 TSR1Q2NL82 804 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 ERC1Q8IUD2 1116 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 NUCB2P80303 420 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 XPCQ01831 940 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 GCC1Q96CN9 775 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 TBC1D2BQ9UPU7 963 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 FCHSD2O94868 740 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 BICD2Q8TD16 824 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 UNC13AQ9UPW8 1703 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 FANCIQ9NVI1 1328 aa9.37□□□□□ -0.91
SMARCA2-252ENST00000636559 PHF23Q9BUL5 403 aaPredicted RBP9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 PSMA5P28066 241 aa9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 SAFBQ15424 915 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 CEP89Q96ST8 783 aa9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 DNAJC2Q99543 621 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 CCDC47Q96A33 483 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 HOOK1Q9UJC3 728 aaKnown RBP9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 FAM135AQ9P2D6 1515 aa9.36□□□□□ -0.91
SMARCA2-252ENST00000636559 TPM1P09493 284 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 WWC1Q8IX03 1113 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 HIP1O00291 1037 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 KCNH5Q8NCM2 988 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 SRCIN1Q9C0H9 1055 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 CNNM1Q9NRU3 951 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 FOSBP53539 338 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 FANCAO15360 1455 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 GSE1Q14687 1217 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 ATF7IPQ6VMQ6 1270 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 NCOA1Q15788 1441 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 BTBD11A6QL63 1104 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 MYL6BP14649 208 aa9.35□□□□□ -0.91
SMARCA2-252ENST00000636559 ZC3H6P61129 1189 aaKnown RBP9.34□□□□□ -0.91
SMARCA2-252ENST00000636559 DENND4BO75064 1496 aaPredicted RBP9.34□□□□□ -0.91
SMARCA2-252ENST00000636559 NFE2L2Q16236 605 aa9.34□□□□□ -0.91
SMARCA2-252ENST00000636559 PDE4CQ08493 712 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 CCDC158Q5M9N0 1113 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 TTC39AQ5SRH9 613 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 FBXO31Q5XUX0 539 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 PIP4K2BP78356 416 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 SART3Q15020 963 aaKnown RBP9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 ANKRD20A12PQ8NF67 263 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
SMARCA2-252ENST00000636559 IDI1Q13907 227 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 MVPQ14764 893 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 CCDC184Q52MB2 194 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 SAMD1Q6SPF0 538 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 ADGRF5Q8IZF2 1346 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 GNL3LQ9NVN8 582 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 CCDC73Q6ZRK6 1079 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 SIL1Q9H173 461 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 BRMS1Q9HCU9 246 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 XBP1P17861 261 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 ZNF428Q96B54 188 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 ARID3AQ99856 593 aa9.32□□□□□ -0.92
SMARCA2-252ENST00000636559 AMOTL2Q9Y2J4 779 aa9.31□□□□□ -0.92
SMARCA2-252ENST00000636559 SASS6Q6UVJ0 657 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms