RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 TLL1O43897 1013 aa9.22□□□□□ -0.93
CRNDE-213ENST00000635991 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CRNDE-213ENST00000635991 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 PRDM9Q9NQV7 894 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 CTHP32929 405 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 GPSM3Q9Y4H4 160 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
CRNDE-213ENST00000635991 NR1H3Q13133 447 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 ALG2Q9H553 416 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ADAMTS19Q8TE59 1207 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ZNF516Q92618 1163 aa9.17□□□□□ -0.94
CRNDE-213ENST00000635991 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
CRNDE-213ENST00000635991 PDXDC2PQ6P474 469 aa9.16□□□□□ -0.94
CRNDE-213ENST00000635991 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
CRNDE-213ENST00000635991 PTK2Q05397 1052 aa9.15□□□□□ -0.94
CRNDE-213ENST00000635991 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
CRNDE-213ENST00000635991 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
CRNDE-213ENST00000635991 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-213ENST00000635991 MCCD1P59942 119 aaPredicted RBP9.13□□□□□ -0.95
CRNDE-213ENST00000635991 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
CRNDE-213ENST00000635991 ABCC9O60706 1549 aa9.13□□□□□ -0.95
CRNDE-213ENST00000635991 KCNC4Q03721 635 aa9.12□□□□□ -0.95
CRNDE-213ENST00000635991 S1PR4O95977 384 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
CRNDE-213ENST00000635991 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
CRNDE-213ENST00000635991 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
CRNDE-213ENST00000635991 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 GGCXP38435 758 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 ARHGAP9Q9BRR9 750 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
CRNDE-213ENST00000635991 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
CRNDE-213ENST00000635991 BPHLQ86WA6 291 aaPredicted RBP9.06□□□□□ -0.96
CRNDE-213ENST00000635991 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
CRNDE-213ENST00000635991 ATP9BO43861 1147 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
CRNDE-213ENST00000635991 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
CRNDE-213ENST00000635991 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
CRNDE-213ENST00000635991 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
CRNDE-213ENST00000635991 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
CRNDE-213ENST00000635991 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
CRNDE-213ENST00000635991 PDE4CQ08493 712 aa9.03□□□□□ -0.96
CRNDE-213ENST00000635991 BAP1Q92560 729 aa9.03□□□□□ -0.96
CRNDE-213ENST00000635991 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 LMOD1P29536 600 aaPredicted RBP9.02□□□□□ -0.97
CRNDE-213ENST00000635991 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
CRNDE-213ENST00000635991 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
CRNDE-213ENST00000635991 AGERQ15109 404 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
CRNDE-213ENST00000635991 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
CRNDE-213ENST00000635991 RFX1P22670 979 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 WNT7BP56706 349 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 ERFEQ4G0M1 354 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
CRNDE-213ENST00000635991 RETREG2Q8NC44 543 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 TRAIPQ9BWF2 469 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 RPIAP49247 311 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 TRIM32Q13049 653 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 RNF135Q8IUD6 432 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
CRNDE-213ENST00000635991 SLC10A4Q96EP9 437 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PIK3CDO00329 1044 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
CRNDE-213ENST00000635991 SKIP12755 728 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 SH3BP2P78314 561 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 MAP7D1Q3KQU3 841 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 CCDC125Q86Z20 511 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms