RNA–Protein interactions for RNA: ENST00000635991.1

CRNDE-213, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 546 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-213ENST00000635991 TLL1O43897 1013 aa9.22□□□□□ -0.93
CRNDE-213ENST00000635991 GPKOWQ92917 476 aaPredicted RBP eCLIP9.22□□□□□ -0.93
CRNDE-213ENST00000635991 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 PRDM9Q9NQV7 894 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
CRNDE-213ENST00000635991 CTHP32929 405 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 GPSM3Q9Y4H4 160 aa9.2□□□□□ -0.94
CRNDE-213ENST00000635991 ZBBXA8MT70 800 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
CRNDE-213ENST00000635991 NR1H3Q13133 447 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 ALG2Q9H553 416 aa9.19□□□□□ -0.94
CRNDE-213ENST00000635991 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ADAMTS19Q8TE59 1207 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 HCSTQ9UBK5 93 aa9.18□□□□□ -0.94
CRNDE-213ENST00000635991 ZNF516Q92618 1163 aa9.17□□□□□ -0.94
CRNDE-213ENST00000635991 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
CRNDE-213ENST00000635991 PDXDC2PQ6P474 469 aa9.16□□□□□ -0.94
CRNDE-213ENST00000635991 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
CRNDE-213ENST00000635991 PTK2Q05397 1052 aa9.15□□□□□ -0.94
CRNDE-213ENST00000635991 SEMA3FQ13275 785 aa9.15□□□□□ -0.94
CRNDE-213ENST00000635991 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
CRNDE-213ENST00000635991 PPP1R15AO75807 674 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-213ENST00000635991 MCCD1P59942 119 aaPredicted RBP9.13□□□□□ -0.95
CRNDE-213ENST00000635991 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
CRNDE-213ENST00000635991 ABCC9O60706 1549 aa9.13□□□□□ -0.95
CRNDE-213ENST00000635991 KCNC4Q03721 635 aa9.12□□□□□ -0.95
CRNDE-213ENST00000635991 S1PR4O95977 384 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
CRNDE-213ENST00000635991 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
CRNDE-213ENST00000635991 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
CRNDE-213ENST00000635991 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
CRNDE-213ENST00000635991 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 SPNS2Q8IVW8 549 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 NFATC2IPQ8NCF5 419 aa9.09□□□□□ -0.95
CRNDE-213ENST00000635991 GGCXP38435 758 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 CFAP70Q5T0N1 1121 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PTCRAQ6ISU1 281 aaPredicted RBP9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 ARHGAP9Q9BRR9 750 aa9.08□□□□□ -0.96
CRNDE-213ENST00000635991 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
CRNDE-213ENST00000635991 SH3RF1Q7Z6J0 888 aa9.07□□□□□ -0.96
CRNDE-213ENST00000635991 BPHLQ86WA6 291 aaPredicted RBP9.06□□□□□ -0.96
CRNDE-213ENST00000635991 OCSTAMPQ9BR26 566 aa9.06□□□□□ -0.96
CRNDE-213ENST00000635991 ATP9BO43861 1147 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ZBTB33Q86T24 672 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ZNF511Q8NB15 262 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 ADAM32Q8TC27 787 aa9.05□□□□□ -0.96
CRNDE-213ENST00000635991 MAFBQ9Y5Q3 323 aaPredicted RBP9.05□□□□□ -0.96
CRNDE-213ENST00000635991 TFIP11Q9UBB9 837 aaKnown RBP9.04□□□□□ -0.96
CRNDE-213ENST00000635991 PCDHB9Q9Y5E1 797 aa9.04□□□□□ -0.96
CRNDE-213ENST00000635991 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
CRNDE-213ENST00000635991 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
CRNDE-213ENST00000635991 PDIA4P13667 645 aaKnown RBP9.03□□□□□ -0.96
CRNDE-213ENST00000635991 PDE4CQ08493 712 aa9.03□□□□□ -0.96
CRNDE-213ENST00000635991 BAP1Q92560 729 aa9.03□□□□□ -0.96
CRNDE-213ENST00000635991 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 LMOD1P29536 600 aaPredicted RBP9.02□□□□□ -0.97
CRNDE-213ENST00000635991 SRPK2P78362 688 aaKnown RBP9.02□□□□□ -0.97
CRNDE-213ENST00000635991 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
CRNDE-213ENST00000635991 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
CRNDE-213ENST00000635991 AGERQ15109 404 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 PLEKHM2Q8IWE5 1019 aa9.01□□□□□ -0.97
CRNDE-213ENST00000635991 CDV3Q9UKY7 258 aaKnown RBP9.01□□□□□ -0.97
CRNDE-213ENST00000635991 MAGEB6P1A0A0J9YX57 407 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 LZTS3O60299 673 aaPredicted RBP9□□□□□ -0.97
CRNDE-213ENST00000635991 RFX1P22670 979 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 WNT7BP56706 349 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 ERFEQ4G0M1 354 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
CRNDE-213ENST00000635991 RETREG2Q8NC44 543 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 TRAIPQ9BWF2 469 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 C1QTNF2Q9BXJ5 285 aa9□□□□□ -0.97
CRNDE-213ENST00000635991 RPIAP49247 311 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 TRIM32Q13049 653 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 IFFO2Q5TF58 517 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 RNF135Q8IUD6 432 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 TRMT44Q8IYL2 757 aaKnown RBP8.99□□□□□ -0.97
CRNDE-213ENST00000635991 SLC10A4Q96EP9 437 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 CARD14Q9BXL6 1004 aa8.99□□□□□ -0.97
CRNDE-213ENST00000635991 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.99□□□□□ -0.97
CRNDE-213ENST00000635991 USP17L5A8MUK1 530 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PIK3CDO00329 1044 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PPEF1O14829 653 aaPredicted RBP8.98□□□□□ -0.97
CRNDE-213ENST00000635991 SKIP12755 728 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 SH3BP2P78314 561 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 NBPF20Q3BBV1 942 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 MAP7D1Q3KQU3 841 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 CCDC125Q86Z20 511 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
CRNDE-213ENST00000635991 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms