RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
SMARCA2-239ENST00000635388 MAP10Q9P2G4 905 aa12.75□□□□□ -0.37
SMARCA2-239ENST00000635388 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
SMARCA2-239ENST00000635388 CCDC82Q8N4S0 544 aa12.73□□□□□ -0.37
SMARCA2-239ENST00000635388 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
SMARCA2-239ENST00000635388 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
SMARCA2-239ENST00000635388 CCNYL3P0C7X3 344 aa12.72□□□□□ -0.37
SMARCA2-239ENST00000635388 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
SMARCA2-239ENST00000635388 NKX2-3Q8TAU0 364 aa12.71□□□□□ -0.37
SMARCA2-239ENST00000635388 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
SMARCA2-239ENST00000635388 EVA1BQ9NVM1 165 aa12.7□□□□□ -0.38
SMARCA2-239ENST00000635388 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
SMARCA2-239ENST00000635388 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
SMARCA2-239ENST00000635388 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
SMARCA2-239ENST00000635388 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SMARCA2-239ENST00000635388 SLC6A16Q9GZN6 736 aa12.69□□□□□ -0.38
SMARCA2-239ENST00000635388 FKBPLQ9UIM3 349 aa12.69□□□□□ -0.38
SMARCA2-239ENST00000635388 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
SMARCA2-239ENST00000635388 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
SMARCA2-239ENST00000635388 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
SMARCA2-239ENST00000635388 ARID3AQ99856 593 aa12.68□□□□□ -0.38
SMARCA2-239ENST00000635388 HCSTQ9UBK5 93 aa12.68□□□□□ -0.38
SMARCA2-239ENST00000635388 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
SMARCA2-239ENST00000635388 KCNH2Q12809 1159 aa12.67□□□□□ -0.38
SMARCA2-239ENST00000635388 CTHP32929 405 aa12.66□□□□□ -0.38
SMARCA2-239ENST00000635388 GLMNQ92990 594 aa12.66□□□□□ -0.38
SMARCA2-239ENST00000635388 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
SMARCA2-239ENST00000635388 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
SMARCA2-239ENST00000635388 S1PR4O95977 384 aa12.65□□□□□ -0.38
SMARCA2-239ENST00000635388 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
SMARCA2-239ENST00000635388 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
SMARCA2-239ENST00000635388 PNMA1Q8ND90 353 aa12.63□□□□□ -0.39
SMARCA2-239ENST00000635388 BAZ1BQ9UIG0 1483 aaKnown RBP12.62□□□□□ -0.39
SMARCA2-239ENST00000635388 FBXO45P0C2W1 286 aa12.62□□□□□ -0.39
SMARCA2-239ENST00000635388 ALG2Q9H553 416 aa12.62□□□□□ -0.39
SMARCA2-239ENST00000635388 SERPINA10Q9UK55 444 aa12.61□□□□□ -0.39
SMARCA2-239ENST00000635388 NR1H3Q13133 447 aa12.6□□□□□ -0.39
SMARCA2-239ENST00000635388 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
SMARCA2-239ENST00000635388 OCSTAMPQ9BR26 566 aa12.6□□□□□ -0.39
SMARCA2-239ENST00000635388 UNC93B1Q9H1C4 597 aa12.6□□□□□ -0.39
SMARCA2-239ENST00000635388 ZBBXA8MT70 800 aa12.59□□□□□ -0.39
SMARCA2-239ENST00000635388 KCNC4Q03721 635 aa12.59□□□□□ -0.39
SMARCA2-239ENST00000635388 CCDC97Q96F63 343 aaPredicted RBP12.59□□□□□ -0.39
SMARCA2-239ENST00000635388 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
SMARCA2-239ENST00000635388 HDGFL1Q5TGJ6 251 aa12.58□□□□□ -0.4
SMARCA2-239ENST00000635388 GPKOWQ92917 476 aaPredicted RBP eCLIP12.58□□□□□ -0.4
SMARCA2-239ENST00000635388 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
SMARCA2-239ENST00000635388 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
SMARCA2-239ENST00000635388 ARMC2Q8NEN0 867 aa12.57□□□□□ -0.4
SMARCA2-239ENST00000635388 SOX11P35716 441 aa12.56□□□□□ -0.4
SMARCA2-239ENST00000635388 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
SMARCA2-239ENST00000635388 MMRN1Q13201 1228 aa12.55□□□□□ -0.4
SMARCA2-239ENST00000635388 NBPF14Q5TI25 921 aa12.55□□□□□ -0.4
SMARCA2-239ENST00000635388 GPSM3Q9Y4H4 160 aa12.55□□□□□ -0.4
SMARCA2-239ENST00000635388 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
SMARCA2-239ENST00000635388 UCN2Q96RP3 112 aa12.54□□□□□ -0.4
SMARCA2-239ENST00000635388 WIZO95785 1651 aa12.54□□□□□ -0.4
SMARCA2-239ENST00000635388 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
SMARCA2-239ENST00000635388 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
SMARCA2-239ENST00000635388 EIF4G2P78344 907 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCA2-239ENST00000635388 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
SMARCA2-239ENST00000635388 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
SMARCA2-239ENST00000635388 PTK2Q05397 1052 aa12.5□□□□□ -0.41
SMARCA2-239ENST00000635388 ANKLE1Q8NAG6 615 aa12.49□□□□□ -0.41
SMARCA2-239ENST00000635388 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
SMARCA2-239ENST00000635388 CFAP70Q5T0N1 1121 aa12.48□□□□□ -0.41
SMARCA2-239ENST00000635388 BAP1Q92560 729 aa12.48□□□□□ -0.41
SMARCA2-239ENST00000635388 LINC01559Q495D7 138 aa12.47□□□□□ -0.41
SMARCA2-239ENST00000635388 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
SMARCA2-239ENST00000635388 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
SMARCA2-239ENST00000635388 ADAM32Q8TC27 787 aa12.47□□□□□ -0.41
SMARCA2-239ENST00000635388 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
SMARCA2-239ENST00000635388 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
SMARCA2-239ENST00000635388 C4orf48Q5BLP8 95 aa12.46□□□□□ -0.41
SMARCA2-239ENST00000635388 FOXJ1Q92949 421 aa12.46□□□□□ -0.41
SMARCA2-239ENST00000635388 PPP1R12CQ9BZL4 782 aa12.46□□□□□ -0.41
SMARCA2-239ENST00000635388 NESP48681 1621 aa12.45□□□□□ -0.42
SMARCA2-239ENST00000635388 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
SMARCA2-239ENST00000635388 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.44□□□□□ -0.42
SMARCA2-239ENST00000635388 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 PIK3CDO00329 1044 aa12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 GGCXP38435 758 aa12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 SH3BP2P78314 561 aa12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 C1QTNF2Q9BXJ5 285 aa12.43□□□□□ -0.42
SMARCA2-239ENST00000635388 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
SMARCA2-239ENST00000635388 TRIM32Q13049 653 aa12.42□□□□□ -0.42
SMARCA2-239ENST00000635388 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
SMARCA2-239ENST00000635388 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
SMARCA2-239ENST00000635388 ERFEQ4G0M1 354 aa12.41□□□□□ -0.42
SMARCA2-239ENST00000635388 EMID1Q96A84 441 aaPredicted RBP12.41□□□□□ -0.42
SMARCA2-239ENST00000635388 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
SMARCA2-239ENST00000635388 SKOR1P84550 965 aa12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 ZBTB33Q86T24 672 aa12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 BPHLQ86WA6 291 aaPredicted RBP12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 FAM174AQ8TBP5 190 aa12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 CARD14Q9BXL6 1004 aa12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
SMARCA2-239ENST00000635388 TOP2AP11388 1531 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms