RNA–Protein interactions for RNA: ENST00000634989.1

SMARCA2-232, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-232ENST00000634989 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
SMARCA2-232ENST00000634989 PATL2C9JE40 543 aaKnown RBP10.04□□□□□ -0.8
SMARCA2-232ENST00000634989 PER1O15534 1290 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-232ENST00000634989 ANKK1Q8NFD2 765 aa10.04□□□□□ -0.8
SMARCA2-232ENST00000634989 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
SMARCA2-232ENST00000634989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 RFX1P22670 979 aa10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 LYPD8Q6UX82 237 aa10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 THOC2Q8NI27 1593 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
SMARCA2-232ENST00000634989 CSB-PGBD3P0DP91 1061 aa10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 SEMA3FQ13275 785 aa10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 NPM2Q86SE8 214 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 SALL2Q9Y467 1007 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 NCAPD3P42695 1498 aa10.02□□□□□ -0.81
SMARCA2-232ENST00000634989 EIF4G2P78344 907 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCA2-232ENST00000634989 PUS10Q3MIT2 529 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-232ENST00000634989 UCN2Q96RP3 112 aa10.01□□□□□ -0.81
SMARCA2-232ENST00000634989 HPS5Q9UPZ3 1129 aa10.01□□□□□ -0.81
SMARCA2-232ENST00000634989 LMOD1P29536 600 aaPredicted RBP9.99□□□□□ -0.81
SMARCA2-232ENST00000634989 USB1Q9BQ65 265 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-232ENST00000634989 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
SMARCA2-232ENST00000634989 BRD1O95696 1058 aa9.98□□□□□ -0.81
SMARCA2-232ENST00000634989 NR1H3Q13133 447 aa9.98□□□□□ -0.81
SMARCA2-232ENST00000634989 ZC3H4Q9UPT8 1303 aaKnown RBP9.98□□□□□ -0.81
SMARCA2-232ENST00000634989 KCNA1Q09470 495 aa9.97□□□□□ -0.81
SMARCA2-232ENST00000634989 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
SMARCA2-232ENST00000634989 RNF19BQ6ZMZ0 732 aa9.97□□□□□ -0.81
SMARCA2-232ENST00000634989 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
SMARCA2-232ENST00000634989 ATG7O95352 703 aa9.96□□□□□ -0.82
SMARCA2-232ENST00000634989 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
SMARCA2-232ENST00000634989 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
SMARCA2-232ENST00000634989 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
SMARCA2-232ENST00000634989 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
SMARCA2-232ENST00000634989 ATP9BO43861 1147 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 NR1I2O75469 434 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 F12P00748 615 aaPredicted RBP9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 APLP1P51693 650 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 PPP4CP60510 307 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 PTPRNQ16849 979 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
SMARCA2-232ENST00000634989 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 FBXO45P0C2W1 286 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 JUNDP17535 347 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 KIF21AQ7Z4S6 1674 aa9.93□□□□□ -0.82
SMARCA2-232ENST00000634989 SCUBE3Q8IX30 993 aa9.92□□□□□ -0.82
SMARCA2-232ENST00000634989 PCDHB3Q9Y5E6 796 aa9.92□□□□□ -0.82
SMARCA2-232ENST00000634989 ZNF592Q92610 1267 aa9.91□□□□□ -0.82
SMARCA2-232ENST00000634989 PLA2G2EQ9NZK7 142 aa9.91□□□□□ -0.82
SMARCA2-232ENST00000634989 SMARCA2P51531 1590 aa9.91□□□□□ -0.82
SMARCA2-232ENST00000634989 HMGXB3Q12766 1538 aa9.9□□□□□ -0.82
SMARCA2-232ENST00000634989 MSS51Q4VC12 460 aa9.89□□□□□ -0.83
SMARCA2-232ENST00000634989 GPSM3Q9Y4H4 160 aa9.89□□□□□ -0.83
SMARCA2-232ENST00000634989 ELOAQ14241 798 aaKnown RBP9.88□□□□□ -0.83
SMARCA2-232ENST00000634989 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
SMARCA2-232ENST00000634989 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
SMARCA2-232ENST00000634989 MAP10Q9P2G4 905 aa9.88□□□□□ -0.83
SMARCA2-232ENST00000634989 TMEM88BA6NKF7 163 aa9.87□□□□□ -0.83
SMARCA2-232ENST00000634989 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
SMARCA2-232ENST00000634989 ARMC2Q8NEN0 867 aa9.87□□□□□ -0.83
SMARCA2-232ENST00000634989 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 MFAP1P55081 439 aaKnown RBP9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 MCCD1P59942 119 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 CDCA8Q53HL2 280 aa9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 TJAP1Q5JTD0 557 aa9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 KANK4Q5T7N3 995 aaPredicted RBP9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 ZNF516Q92618 1163 aa9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 LAMC3Q9Y6N6 1575 aa9.86□□□□□ -0.83
SMARCA2-232ENST00000634989 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
SMARCA2-232ENST00000634989 CTHP32929 405 aa9.85□□□□□ -0.83
SMARCA2-232ENST00000634989 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
SMARCA2-232ENST00000634989 RGS22Q8NE09 1264 aa9.85□□□□□ -0.83
SMARCA2-232ENST00000634989 USP17L3A6NCW0 530 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 USP17L4A6NCW7 530 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 ITGBL1O95965 494 aaPredicted RBP9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 PTK2Q05397 1052 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 PDXDC2PQ6P474 469 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 USP17L2Q6R6M4 530 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 USP17L1Q7RTZ2 530 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 BAZ1AQ9NRL2 1556 aaPredicted RBP9.84□□□□□ -0.83
SMARCA2-232ENST00000634989 USP17L5A8MUK1 530 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 SKIP12755 728 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 MMP16P51512 607 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 MTRQ99707 1265 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
SMARCA2-232ENST00000634989 SMARCA4P51532 1647 aa9.82□□□□□ -0.84
SMARCA2-232ENST00000634989 CARNS1A5YM72 827 aa9.82□□□□□ -0.84
SMARCA2-232ENST00000634989 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
SMARCA2-232ENST00000634989 NKX2-3Q8TAU0 364 aa9.82□□□□□ -0.84
SMARCA2-232ENST00000634989 SPSB2Q99619 263 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms