RNA–Protein interactions for RNA: ENST00000634989.1

SMARCA2-232, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2

Gene SMARCA2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-232ENST00000634989 AEBP2Q6ZN18 517 aaPredicted RBP24.63■■□□□ 1.53
SMARCA2-232ENST00000634989 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
SMARCA2-232ENST00000634989 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
SMARCA2-232ENST00000634989 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
SMARCA2-232ENST00000634989 FOXD1Q16676 465 aa19.37■□□□□ 0.69
SMARCA2-232ENST00000634989 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
SMARCA2-232ENST00000634989 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
SMARCA2-232ENST00000634989 ADRA2BP18089 450 aa18.51■□□□□ 0.55
SMARCA2-232ENST00000634989 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
SMARCA2-232ENST00000634989 MSH5O43196 834 aa17.7■□□□□ 0.42
SMARCA2-232ENST00000634989 KCNA4P22459 653 aa16.91■□□□□ 0.3
SMARCA2-232ENST00000634989 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
SMARCA2-232ENST00000634989 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
SMARCA2-232ENST00000634989 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
SMARCA2-232ENST00000634989 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
SMARCA2-232ENST00000634989 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
SMARCA2-232ENST00000634989 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
SMARCA2-232ENST00000634989 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
SMARCA2-232ENST00000634989 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
SMARCA2-232ENST00000634989 SLC4A1APQ9BWU0 796 aaKnown RBP16.25■□□□□ 0.19
SMARCA2-232ENST00000634989 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
SMARCA2-232ENST00000634989 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
SMARCA2-232ENST00000634989 CSRNP3Q8WYN3 585 aa16.07■□□□□ 0.16
SMARCA2-232ENST00000634989 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
SMARCA2-232ENST00000634989 DCAF8L1A6NGE4 600 aa15.79■□□□□ 0.12
SMARCA2-232ENST00000634989 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
SMARCA2-232ENST00000634989 ZBTB22O15209 634 aa15.57■□□□□ 0.08
SMARCA2-232ENST00000634989 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
SMARCA2-232ENST00000634989 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
SMARCA2-232ENST00000634989 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
SMARCA2-232ENST00000634989 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMARCA2-232ENST00000634989 U3KPZ7 1027 aaPredicted RBP15.15■□□□□ 0.02
SMARCA2-232ENST00000634989 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
SMARCA2-232ENST00000634989 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
SMARCA2-232ENST00000634989 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
SMARCA2-232ENST00000634989 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
SMARCA2-232ENST00000634989 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-232ENST00000634989 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
SMARCA2-232ENST00000634989 CAPN15O75808 1086 aa14.63□□□□□ -0.07
SMARCA2-232ENST00000634989 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
SMARCA2-232ENST00000634989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
SMARCA2-232ENST00000634989 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
SMARCA2-232ENST00000634989 TRHP20396 242 aaPredicted RBP14.55□□□□□ -0.08
SMARCA2-232ENST00000634989 DSG3P32926 999 aa14.52□□□□□ -0.09
SMARCA2-232ENST00000634989 AMER1Q5JTC6 1135 aaPredicted RBP14.5□□□□□ -0.09
SMARCA2-232ENST00000634989 FKBP8Q14318 412 aa14.47□□□□□ -0.09
SMARCA2-232ENST00000634989 ABCB7O75027 752 aa14.44□□□□□ -0.1
SMARCA2-232ENST00000634989 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
SMARCA2-232ENST00000634989 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
SMARCA2-232ENST00000634989 APLP2Q06481 763 aa14.39□□□□□ -0.11
SMARCA2-232ENST00000634989 POLA2Q14181 598 aa14.28□□□□□ -0.12
SMARCA2-232ENST00000634989 SLC24A1O60721 1099 aa14.21□□□□□ -0.13
SMARCA2-232ENST00000634989 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
SMARCA2-232ENST00000634989 OSCARQ8IYS5 282 aa13.85□□□□□ -0.19
SMARCA2-232ENST00000634989 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
SMARCA2-232ENST00000634989 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
SMARCA2-232ENST00000634989 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SMARCA2-232ENST00000634989 FBLN2P98095 1184 aa13.74□□□□□ -0.21
SMARCA2-232ENST00000634989 PROM2Q8N271 834 aa13.74□□□□□ -0.21
SMARCA2-232ENST00000634989 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-232ENST00000634989 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
SMARCA2-232ENST00000634989 SPDYE2BA6NHP3 402 aa13.51□□□□□ -0.25
SMARCA2-232ENST00000634989 SPDYE6P0CI01 402 aa13.51□□□□□ -0.25
SMARCA2-232ENST00000634989 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
SMARCA2-232ENST00000634989 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
SMARCA2-232ENST00000634989 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
SMARCA2-232ENST00000634989 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
SMARCA2-232ENST00000634989 REM2Q8IYK8 340 aaPredicted RBP13.46□□□□□ -0.25
SMARCA2-232ENST00000634989 IFNLR1Q8IU57 520 aaPredicted RBP13.44□□□□□ -0.26
SMARCA2-232ENST00000634989 PABPN1Q86U42 306 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMARCA2-232ENST00000634989 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
SMARCA2-232ENST00000634989 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
SMARCA2-232ENST00000634989 PKD2Q13563 968 aa13.27□□□□□ -0.29
SMARCA2-232ENST00000634989 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
SMARCA2-232ENST00000634989 STAG3Q9UJ98 1225 aa13.23□□□□□ -0.29
SMARCA2-232ENST00000634989 DCAF8L2P0C7V8 631 aa13.22□□□□□ -0.29
SMARCA2-232ENST00000634989 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
SMARCA2-232ENST00000634989 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
SMARCA2-232ENST00000634989 KLHL34Q8N239 644 aa13.16□□□□□ -0.3
SMARCA2-232ENST00000634989 SPDYE1Q8NFV5 336 aaPredicted RBP13.15□□□□□ -0.3
SMARCA2-232ENST00000634989 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
SMARCA2-232ENST00000634989 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMARCA2-232ENST00000634989 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
SMARCA2-232ENST00000634989 POTEHQ6S545 545 aa13.09□□□□□ -0.31
SMARCA2-232ENST00000634989 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
SMARCA2-232ENST00000634989 ECM2O94769 699 aaPredicted RBP13.06□□□□□ -0.32
SMARCA2-232ENST00000634989 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
SMARCA2-232ENST00000634989 MIER1Q8N108 512 aa13□□□□□ -0.33
SMARCA2-232ENST00000634989 BBXQ8WY36 941 aaPredicted RBP13□□□□□ -0.33
SMARCA2-232ENST00000634989 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
SMARCA2-232ENST00000634989 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
SMARCA2-232ENST00000634989 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.99□□□□□ -0.33
SMARCA2-232ENST00000634989 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-232ENST00000634989 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
SMARCA2-232ENST00000634989 PLEKHG5O94827 1062 aa12.94□□□□□ -0.34
SMARCA2-232ENST00000634989 CREBZFQ9NS37 354 aa12.92□□□□□ -0.34
SMARCA2-232ENST00000634989 BCANQ96GW7 911 aa12.91□□□□□ -0.34
SMARCA2-232ENST00000634989 RGL2O15211 777 aa12.89□□□□□ -0.35
SMARCA2-232ENST00000634989 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMARCA2-232ENST00000634989 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms