RNA–Protein interactions for RNA: ENST00000634435.1

SMARCA2-223, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-223	ENST00000634435	TRO	Q12816	1431 aa	Predicted RBP	10.56	□□□□□ -0.72
SMARCA2-223	ENST00000634435	PREX1	Q8TCU6	1659 aa		10.56	□□□□□ -0.72
SMARCA2-223	ENST00000634435	BCL2L12	Q9HB09	334 aa		10.55	□□□□□ -0.72
SMARCA2-223	ENST00000634435	KDM5C	P41229	1560 aa		10.55	□□□□□ -0.72
SMARCA2-223	ENST00000634435	MYO5C	Q9NQX4	1742 aa		10.55	□□□□□ -0.72
SMARCA2-223	ENST00000634435	RCCD1	A6NED2	376 aa		10.54	□□□□□ -0.72
SMARCA2-223	ENST00000634435	TUSC1	Q2TAM9	212 aa		10.54	□□□□□ -0.72
SMARCA2-223	ENST00000634435	SULF1	Q8IWU6	871 aa		10.54	□□□□□ -0.72
SMARCA2-223	ENST00000634435	AFAP1	Q8N556	730 aa		10.54	□□□□□ -0.72
SMARCA2-223	ENST00000634435	EYA1	Q99502	592 aa		10.54	□□□□□ -0.72
SMARCA2-223	ENST00000634435	DIP2C	Q9Y2E4	1556 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	PPP1R3G	B7ZBB8	358 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	CD46	P15529	392 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	RFC5	P40937	340 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	TMEM259	Q4ZIN3	620 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	PPP2R2D	Q66LE6	453 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	ZNF687	Q8N1G0	1237 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	FNBP4	Q8N3X1	1017 aa	Predicted RBP	10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	ESF1	Q9H501	851 aa	Known RBP	10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	FAM198A	Q9UFP1	575 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	ARHGAP35	Q9NRY4	1499 aa		10.53	□□□□□ -0.72
SMARCA2-223	ENST00000634435	CCDC82	Q8N4S0	544 aa		10.52	□□□□□ -0.73
SMARCA2-223	ENST00000634435	SPIRE2	Q8WWL2	714 aa		10.52	□□□□□ -0.73
SMARCA2-223	ENST00000634435	LHX6	Q9UPM6	363 aa		10.52	□□□□□ -0.73
SMARCA2-223	ENST00000634435	COL9A1	P20849	921 aa		10.51	□□□□□ -0.73
SMARCA2-223	ENST00000634435	DNAJB2	P25686	324 aa		10.51	□□□□□ -0.73
SMARCA2-223	ENST00000634435	NBPF26	B4DH59	902 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	PTPRE	P23469	700 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	RIC3	Q7Z5B4	369 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	POM121	Q96HA1	1249 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	LIMD1	Q9UGP4	676 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	RERE	Q9P2R6	1566 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	ABCA6	Q8N139	1617 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	PTPRT	O14522	1441 aa		10.5	□□□□□ -0.73
SMARCA2-223	ENST00000634435	MLH3	Q9UHC1	1453 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	ABCC1	P33527	1531 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	SPTLC1	O15269	473 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	GJA5	P36382	358 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	ILDR2	Q71H61	639 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	TSKS	Q9UJT2	592 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	TRAPPC8	Q9Y2L5	1435 aa		10.49	□□□□□ -0.73
SMARCA2-223	ENST00000634435	AGL	P35573	1532 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	STRC	Q7RTU9	1775 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	SOCS7	O14512	581 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	TMEM134	Q9H6X4	195 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	COG6	Q9Y2V7	657 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	CNTLN	Q9NXG0	1405 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	SPATA31D1	Q6ZQQ2	1576 aa		10.48	□□□□□ -0.73
SMARCA2-223	ENST00000634435	NUDT18	Q6ZVK8	323 aa		10.47	□□□□□ -0.73
SMARCA2-223	ENST00000634435	NUTM1	Q86Y26	1132 aa		10.47	□□□□□ -0.73
SMARCA2-223	ENST00000634435	NCOA1	Q15788	1441 aa		10.47	□□□□□ -0.73
SMARCA2-223	ENST00000634435	CCDC18	Q5T9S5	1454 aa		10.47	□□□□□ -0.73
SMARCA2-223	ENST00000634435	TRIM6-TRIM34	B2RNG4	842 aa		10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	PACS2	Q86VP3	889 aa		10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	TATDN2	Q93075	761 aa		10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	SNRK	Q9NRH2	765 aa		10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	PODXL2	Q9NZ53	605 aa		10.46	□□□□□ -0.73
SMARCA2-223	ENST00000634435	PREX2	Q70Z35	1606 aa		10.46	□□□□□ -0.74
SMARCA2-223	ENST00000634435	C3	P01024	1663 aa		10.45	□□□□□ -0.74
SMARCA2-223	ENST00000634435	DDX11L8	A8MPP1	907 aa		10.45	□□□□□ -0.74
SMARCA2-223	ENST00000634435	SERPINA10	Q9UK55	444 aa		10.45	□□□□□ -0.74
SMARCA2-223	ENST00000634435	PNMA3	Q9UL41	463 aa		10.45	□□□□□ -0.74
SMARCA2-223	ENST00000634435	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.45	□□□□□ -0.74
SMARCA2-223	ENST00000634435	CASKIN1	Q8WXD9	1431 aa		10.44	□□□□□ -0.74
SMARCA2-223	ENST00000634435	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.44	□□□□□ -0.74
SMARCA2-223	ENST00000634435	ITSN2	Q9NZM3	1697 aa		10.44	□□□□□ -0.74
SMARCA2-223	ENST00000634435	LTBP4	Q8N2S1	1624 aa		10.44	□□□□□ -0.74
SMARCA2-223	ENST00000634435	IQSEC2	Q5JU85	1478 aa		10.43	□□□□□ -0.74
SMARCA2-223	ENST00000634435	NPAT	Q14207	1427 aa		10.43	□□□□□ -0.74
SMARCA2-223	ENST00000634435	SETD1B	Q9UPS6	1966 aa	Known RBP	10.43	□□□□□ -0.74
SMARCA2-223	ENST00000634435	CCDC97	Q96F63	343 aa	Predicted RBP	10.43	□□□□□ -0.74
SMARCA2-223	ENST00000634435	CDC42BPB	Q9Y5S2	1711 aa		10.43	□□□□□ -0.74
SMARCA2-223	ENST00000634435	MOXD2P	A6NHM9	499 aa		10.42	□□□□□ -0.74
SMARCA2-223	ENST00000634435	C3orf80	F5H4A9	247 aa		10.42	□□□□□ -0.74
SMARCA2-223	ENST00000634435	SYCP2	Q9BX26	1530 aa		10.42	□□□□□ -0.74
SMARCA2-223	ENST00000634435	CAMSAP1	Q5T5Y3	1602 aa		10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	SPAG9	O60271	1321 aa	Known RBP	10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	SAMD9L	Q8IVG5	1584 aa		10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	MTMR14	Q8NCE2	650 aa		10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	KIDINS220	Q9ULH0	1771 aa		10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	LRRIQ1	Q96JM4	1722 aa		10.41	□□□□□ -0.74
SMARCA2-223	ENST00000634435	LILRB3	O75022	631 aa		10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	TRIM26	Q12899	539 aa	Predicted RBP	10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	ANKRD13D	Q6ZTN6	518 aa		10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	WWC1	Q8IX03	1113 aa		10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	PRM3	Q9NNZ6	103 aa		10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	FYCO1	Q9BQS8	1478 aa		10.4	□□□□□ -0.74
SMARCA2-223	ENST00000634435	ZMYM3	Q14202	1370 aa		10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PDIA4	P13667	645 aa	Known RBP	10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	USP46	P62068	366 aa		10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PRPF38B	Q5VTL8	546 aa	Known RBP	10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.39	□□□□□ -0.75
SMARCA2-223	ENST00000634435	ATP7A	Q04656	1500 aa		10.38	□□□□□ -0.75
SMARCA2-223	ENST00000634435	UBAP1L	F5GYI3	381 aa		10.38	□□□□□ -0.75
SMARCA2-223	ENST00000634435	KDM4A	O75164	1064 aa		10.38	□□□□□ -0.75
SMARCA2-223	ENST00000634435	RSPH4A	Q5TD94	716 aa		10.38	□□□□□ -0.75
SMARCA2-223	ENST00000634435	MROH2A	A6NES4	1674 aa		10.38	□□□□□ -0.75
SMARCA2-223	ENST00000634435	PLA2R1	Q13018	1463 aa		10.37	□□□□□ -0.75

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