RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 TSR3Q9UJK0 312 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-216ENST00000634178 SLC27A5Q9Y2P5 690 aa8.74□□□□□ -1.01
TRAPPC9-216ENST00000634178 GPR37L1O60883 481 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 RFX1P22670 979 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 CFAP70Q5T0N1 1121 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 LYPD8Q6UX82 237 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 ZNF592Q92610 1267 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
TRAPPC9-216ENST00000634178 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC9-216ENST00000634178 PPP4CP60510 307 aa8.72□□□□□ -1.01
TRAPPC9-216ENST00000634178 EPS8L1Q8TE68 723 aa8.72□□□□□ -1.01
TRAPPC9-216ENST00000634178 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
TRAPPC9-216ENST00000634178 ZC3H4Q9UPT8 1303 aaKnown RBP8.72□□□□□ -1.01
TRAPPC9-216ENST00000634178 PER1O15534 1290 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC9-216ENST00000634178 NR1I2O75469 434 aa8.71□□□□□ -1.02
TRAPPC9-216ENST00000634178 LMOD1P29536 600 aaPredicted RBP8.71□□□□□ -1.02
TRAPPC9-216ENST00000634178 LAPTM4AQ15012 233 aa8.71□□□□□ -1.02
TRAPPC9-216ENST00000634178 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
TRAPPC9-216ENST00000634178 FMNL1O95466 1100 aaPredicted RBP8.7□□□□□ -1.02
TRAPPC9-216ENST00000634178 NR1H3Q13133 447 aa8.7□□□□□ -1.02
TRAPPC9-216ENST00000634178 NPM2Q86SE8 214 aaKnown RBP8.7□□□□□ -1.02
TRAPPC9-216ENST00000634178 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC9-216ENST00000634178 TFIP11Q9UBB9 837 aaKnown RBP8.69□□□□□ -1.02
TRAPPC9-216ENST00000634178 ZBBXA8MT70 800 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 GFRA3O60609 400 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 BRD1O95696 1058 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 SRPK2P78362 688 aaKnown RBP8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 KCNA1Q09470 495 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 FKBPLQ9UIM3 349 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 PCDHB3Q9Y5E6 796 aa8.68□□□□□ -1.02
TRAPPC9-216ENST00000634178 PTPRNQ16849 979 aa8.67□□□□□ -1.02
TRAPPC9-216ENST00000634178 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
TRAPPC9-216ENST00000634178 ATP9BO43861 1147 aa8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 ATG7O95352 703 aa8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 JUNDP17535 347 aa8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 MCCD1P59942 119 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 SCUBE3Q8IX30 993 aa8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
TRAPPC9-216ENST00000634178 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 BLOC1S3Q6QNY0 202 aa8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 UCN2Q96RP3 112 aa8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 MAFBQ9Y5Q3 323 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC9-216ENST00000634178 NRG2O14511 850 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC9-216ENST00000634178 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
TRAPPC9-216ENST00000634178 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
TRAPPC9-216ENST00000634178 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
TRAPPC9-216ENST00000634178 F12P00748 615 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC9-216ENST00000634178 CTHP32929 405 aa8.63□□□□□ -1.03
TRAPPC9-216ENST00000634178 GZF1Q9H116 711 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC9-216ENST00000634178 FBXO45P0C2W1 286 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 APLP1P51693 650 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 PTK2Q05397 1052 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 MSS51Q4VC12 460 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 MTRQ99707 1265 aa8.62□□□□□ -1.03
TRAPPC9-216ENST00000634178 PPP1R18Q6NYC8 613 aa8.61□□□□□ -1.03
TRAPPC9-216ENST00000634178 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
TRAPPC9-216ENST00000634178 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
TRAPPC9-216ENST00000634178 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
TRAPPC9-216ENST00000634178 RB1CC1Q8TDY2 1594 aa8.6□□□□□ -1.03
TRAPPC9-216ENST00000634178 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 ELOAQ14241 798 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 SPSB2Q99619 263 aa8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 MAP10Q9P2G4 905 aa8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-216ENST00000634178 KCNH2Q12809 1159 aa8.58□□□□□ -1.04
TRAPPC9-216ENST00000634178 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
TRAPPC9-216ENST00000634178 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
TRAPPC9-216ENST00000634178 IL21Q9HBE4 155 aa8.58□□□□□ -1.04
TRAPPC9-216ENST00000634178 DXOO77932 396 aaKnown RBP8.57□□□□□ -1.04
TRAPPC9-216ENST00000634178 SKIP12755 728 aa8.57□□□□□ -1.04
TRAPPC9-216ENST00000634178 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
TRAPPC9-216ENST00000634178 CDCA8Q53HL2 280 aa8.57□□□□□ -1.04
TRAPPC9-216ENST00000634178 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
TRAPPC9-216ENST00000634178 MMP16P51512 607 aa8.56□□□□□ -1.04
TRAPPC9-216ENST00000634178 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
TRAPPC9-216ENST00000634178 USP17L3A6NCW0 530 aa8.55□□□□□ -1.04
TRAPPC9-216ENST00000634178 USP17L4A6NCW7 530 aa8.55□□□□□ -1.04
TRAPPC9-216ENST00000634178 USP17L2Q6R6M4 530 aa8.55□□□□□ -1.04
TRAPPC9-216ENST00000634178 USP17L1Q7RTZ2 530 aa8.55□□□□□ -1.04
TRAPPC9-216ENST00000634178 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
TRAPPC9-216ENST00000634178 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 NKX2-3Q8TAU0 364 aa8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 CEP126Q9P2H0 1117 aa8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 PCDHB9Q9Y5E1 797 aa8.54□□□□□ -1.04
TRAPPC9-216ENST00000634178 FAM196BA6NMK8 535 aa8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 ATP5J2-PTCD1G3V325 749 aa8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 MAP7D1Q3KQU3 841 aa8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 LARP1Q6PKG0 1096 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-216ENST00000634178 RNF135Q8IUD6 432 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms