RNA–Protein interactions for RNA: ENST00000633674.1

LINC01002-232, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 1 (best)

Gene LINC01002, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-232ENST00000633674 RGL3Q3MIN7 710 aa11.48□□□□□ -0.57
LINC01002-232ENST00000633674 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
LINC01002-232ENST00000633674 ASXL1Q8IXJ9 1541 aa11.48□□□□□ -0.57
LINC01002-232ENST00000633674 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
LINC01002-232ENST00000633674 ROBO2Q9HCK4 1378 aa11.46□□□□□ -0.57
LINC01002-232ENST00000633674 PDCD7Q8N8D1 485 aaKnown RBP11.46□□□□□ -0.57
LINC01002-232ENST00000633674 CCDC144AA2RUR9 1427 aa11.45□□□□□ -0.58
LINC01002-232ENST00000633674 ZNF772Q68DY9 489 aaPredicted RBP11.45□□□□□ -0.58
LINC01002-232ENST00000633674 LRRC59Q96AG4 307 aaKnown RBP11.45□□□□□ -0.58
LINC01002-232ENST00000633674 PCDHB8Q9UN66 801 aa11.45□□□□□ -0.58
LINC01002-232ENST00000633674 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
LINC01002-232ENST00000633674 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
LINC01002-232ENST00000633674 PTCH1Q13635 1447 aa11.44□□□□□ -0.58
LINC01002-232ENST00000633674 PPLO60437 1756 aa11.44□□□□□ -0.58
LINC01002-232ENST00000633674 ADGRF5Q8IZF2 1346 aa11.44□□□□□ -0.58
LINC01002-232ENST00000633674 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
LINC01002-232ENST00000633674 ZNF467Q7Z7K2 595 aaPredicted RBP11.44□□□□□ -0.58
LINC01002-232ENST00000633674 C1orf167Q5SNV9 1468 aa11.44□□□□□ -0.58
LINC01002-232ENST00000633674 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
LINC01002-232ENST00000633674 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
LINC01002-232ENST00000633674 MKRN3Q13064 507 aaKnown RBP11.43□□□□□ -0.58
LINC01002-232ENST00000633674 ORAI2Q96SN7 254 aa11.43□□□□□ -0.58
LINC01002-232ENST00000633674 STK26Q9P289 416 aa11.43□□□□□ -0.58
LINC01002-232ENST00000633674 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
LINC01002-232ENST00000633674 AFF2P51816 1311 aa11.41□□□□□ -0.58
LINC01002-232ENST00000633674 TMEM132EQ6IEE7 984 aa11.41□□□□□ -0.58
LINC01002-232ENST00000633674 C8orf37Q96NL8 207 aa11.41□□□□□ -0.58
LINC01002-232ENST00000633674 SPATA31E1Q6ZUB1 1445 aa11.41□□□□□ -0.58
LINC01002-232ENST00000633674 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
LINC01002-232ENST00000633674 RXRBP28702 533 aa11.4□□□□□ -0.58
LINC01002-232ENST00000633674 WAPLQ7Z5K2 1190 aa11.4□□□□□ -0.58
LINC01002-232ENST00000633674 ANKRD30BQ9BXX2 1392 aa11.4□□□□□ -0.59
LINC01002-232ENST00000633674 NUTM2FA1L443 756 aa11.39□□□□□ -0.59
LINC01002-232ENST00000633674 ADAMTS2O95450 1211 aa11.39□□□□□ -0.59
LINC01002-232ENST00000633674 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
LINC01002-232ENST00000633674 PRAG1Q86YV5 1406 aa11.39□□□□□ -0.59
LINC01002-232ENST00000633674 HS3ST6Q96QI5 342 aa11.39□□□□□ -0.59
LINC01002-232ENST00000633674 SOS2Q07890 1332 aaPredicted RBP11.38□□□□□ -0.59
LINC01002-232ENST00000633674 GSE1Q14687 1217 aa11.38□□□□□ -0.59
LINC01002-232ENST00000633674 KRTAP3-3Q9BYR6 98 aa11.38□□□□□ -0.59
LINC01002-232ENST00000633674 KRTAP3-2Q9BYR7 98 aa11.38□□□□□ -0.59
LINC01002-232ENST00000633674 NGLY1Q96IV0 654 aa11.37□□□□□ -0.59
LINC01002-232ENST00000633674 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
LINC01002-232ENST00000633674 LRPPRCP42704 1394 aaKnown RBP11.37□□□□□ -0.59
LINC01002-232ENST00000633674 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
LINC01002-232ENST00000633674 FOXO3O43524 673 aa11.36□□□□□ -0.59
LINC01002-232ENST00000633674 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
LINC01002-232ENST00000633674 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
LINC01002-232ENST00000633674 PLEKHH1Q9ULM0 1364 aa11.36□□□□□ -0.59
LINC01002-232ENST00000633674 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 FAM205CA6NFA0 338 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC01002-232ENST00000633674 ABCC11Q96J66 1382 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 TECPR2O15040 1411 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
LINC01002-232ENST00000633674 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
LINC01002-232ENST00000633674 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
LINC01002-232ENST00000633674 CHRM1P11229 460 aaPredicted RBP11.34□□□□□ -0.59
LINC01002-232ENST00000633674 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
LINC01002-232ENST00000633674 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01002-232ENST00000633674 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
LINC01002-232ENST00000633674 LAMC1P11047 1609 aa11.34□□□□□ -0.59
LINC01002-232ENST00000633674 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
LINC01002-232ENST00000633674 SAFB2Q14151 953 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01002-232ENST00000633674 USP21Q9UK80 565 aa11.32□□□□□ -0.6
LINC01002-232ENST00000633674 DHX57Q6P158 1386 aaKnown RBP11.31□□□□□ -0.6
LINC01002-232ENST00000633674 POTEB3A0JP26 581 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 FKBP8Q14318 412 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 POTEBQ6S5H4 581 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 KDM2AQ9Y2K7 1162 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 KNDC1Q76NI1 1749 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 PXDNQ92626 1479 aa11.31□□□□□ -0.6
LINC01002-232ENST00000633674 CDK12Q9NYV4 1490 aaPredicted RBP11.31□□□□□ -0.6
LINC01002-232ENST00000633674 SIRT1Q96EB6 747 aa11.3□□□□□ -0.6
LINC01002-232ENST00000633674 PRAM1Q96QH2 718 aa11.3□□□□□ -0.6
LINC01002-232ENST00000633674 NRXN1Q9ULB1 1477 aa11.3□□□□□ -0.6
LINC01002-232ENST00000633674 RGS12O14924 1447 aa11.29□□□□□ -0.6
LINC01002-232ENST00000633674 KRT28Q7Z3Y7 464 aa11.29□□□□□ -0.6
LINC01002-232ENST00000633674 POGKQ9P215 609 aa11.29□□□□□ -0.6
LINC01002-232ENST00000633674 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
LINC01002-232ENST00000633674 MYOM2P54296 1465 aa11.29□□□□□ -0.6
LINC01002-232ENST00000633674 PSEN1P49768 467 aa11.28□□□□□ -0.6
LINC01002-232ENST00000633674 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
LINC01002-232ENST00000633674 DCAF11Q8TEB1 546 aa11.28□□□□□ -0.6
LINC01002-232ENST00000633674 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
LINC01002-232ENST00000633674 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
LINC01002-232ENST00000633674 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.6
LINC01002-232ENST00000633674 TRAK1Q9UPV9 953 aa11.27□□□□□ -0.61
LINC01002-232ENST00000633674 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
LINC01002-232ENST00000633674 G3V3G9 751 aa11.26□□□□□ -0.61
LINC01002-232ENST00000633674 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
LINC01002-232ENST00000633674 HAP1P54257 671 aaPredicted RBP11.25□□□□□ -0.61
LINC01002-232ENST00000633674 PSME1Q06323 249 aa11.25□□□□□ -0.61
LINC01002-232ENST00000633674 LMOD2Q6P5Q4 547 aa11.25□□□□□ -0.61
LINC01002-232ENST00000633674 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
LINC01002-232ENST00000633674 ATRNO75882 1429 aa11.25□□□□□ -0.61
LINC01002-232ENST00000633674 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
LINC01002-232ENST00000633674 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms