RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 EFCAB3Q8N7B9 438 aa8.06□□□□□ -1.12
LINC00550-202ENST00000629570 DCAF11Q8TEB1 546 aa8.06□□□□□ -1.12
LINC00550-202ENST00000629570 IQSEC2Q5JU85 1478 aa8.06□□□□□ -1.12
LINC00550-202ENST00000629570 CHD2O14647 1828 aaKnown RBP8.06□□□□□ -1.12
LINC00550-202ENST00000629570 SPNS2Q8IVW8 549 aa8.05□□□□□ -1.12
LINC00550-202ENST00000629570 AMOTL2Q9Y2J4 779 aa8.05□□□□□ -1.12
LINC00550-202ENST00000629570 KDM2AQ9Y2K7 1162 aa8.05□□□□□ -1.12
LINC00550-202ENST00000629570 TMEM94Q12767 1356 aa8.05□□□□□ -1.12
LINC00550-202ENST00000629570 XIRP1Q702N8 1843 aaKnown RBP8.04□□□□□ -1.12
LINC00550-202ENST00000629570 POTEB3A0JP26 581 aa8.04□□□□□ -1.12
LINC00550-202ENST00000629570 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
LINC00550-202ENST00000629570 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
LINC00550-202ENST00000629570 POTEBQ6S5H4 581 aa8.04□□□□□ -1.12
LINC00550-202ENST00000629570 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
LINC00550-202ENST00000629570 TMEM132EQ6IEE7 984 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 PROSER2Q86WR7 435 aaPredicted RBP8.03□□□□□ -1.12
LINC00550-202ENST00000629570 L3MBTL2Q969R5 705 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 RNF25Q96BH1 459 aaPredicted RBP8.03□□□□□ -1.12
LINC00550-202ENST00000629570 HS3ST6Q96QI5 342 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 LAMC1P11047 1609 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 PTCH1Q13635 1447 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 PRAG1Q86YV5 1406 aa8.03□□□□□ -1.12
LINC00550-202ENST00000629570 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
LINC00550-202ENST00000629570 C14orf93Q9H972 538 aaKnown RBP8.02□□□□□ -1.13
LINC00550-202ENST00000629570 LRPPRCP42704 1394 aaKnown RBP8.01□□□□□ -1.13
LINC00550-202ENST00000629570 UBAP1LF5GYI3 381 aa8.01□□□□□ -1.13
LINC00550-202ENST00000629570 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
LINC00550-202ENST00000629570 FBXO41Q8TF61 875 aa8.01□□□□□ -1.13
LINC00550-202ENST00000629570 STK26Q9P289 416 aa8.01□□□□□ -1.13
LINC00550-202ENST00000629570 TECPR2O15040 1411 aa8.01□□□□□ -1.13
LINC00550-202ENST00000629570 YTHDC2Q9H6S0 1430 aaKnown RBP8.01□□□□□ -1.13
LINC00550-202ENST00000629570 TONSLQ96HA7 1378 aa8□□□□□ -1.13
LINC00550-202ENST00000629570 STAC3Q96MF2 364 aa8□□□□□ -1.13
LINC00550-202ENST00000629570 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
LINC00550-202ENST00000629570 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
LINC00550-202ENST00000629570 MSH6P52701 1360 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 ABCC11Q96J66 1382 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 PLEKHH1Q9ULM0 1364 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.99□□□□□ -1.13
LINC00550-202ENST00000629570 KNDC1Q76NI1 1749 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 C14orf37Q86TY3 774 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 NALCNQ8IZF0 1738 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 CCER1Q8TC90 406 aaPredicted RBP7.99□□□□□ -1.13
LINC00550-202ENST00000629570 ZFP91Q96JP5 570 aaPredicted RBP7.99□□□□□ -1.13
LINC00550-202ENST00000629570 ADGRL3Q9HAR2 1447 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 NCOA3Q9Y6Q9 1424 aa7.99□□□□□ -1.13
LINC00550-202ENST00000629570 PIP4K2BP78356 416 aa7.98□□□□□ -1.13
LINC00550-202ENST00000629570 NBPF1Q3BBV0 1214 aa7.98□□□□□ -1.13
LINC00550-202ENST00000629570 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
LINC00550-202ENST00000629570 CLSPNQ9HAW4 1339 aa7.98□□□□□ -1.13
LINC00550-202ENST00000629570 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
LINC00550-202ENST00000629570 KIAA1210Q9ULL0 1709 aa7.98□□□□□ -1.13
LINC00550-202ENST00000629570 TOM1O60784 492 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 NBPF8Q3BBV2 869 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 WAPLQ7Z5K2 1190 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 ZNF710Q8N1W2 664 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 C19orf44Q9H6X5 657 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 TRAK1Q9UPV9 953 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 DLC1Q96QB1 1528 aa7.97□□□□□ -1.13
LINC00550-202ENST00000629570 TRPM1Q7Z4N2 1603 aa7.96□□□□□ -1.13
LINC00550-202ENST00000629570 DCCP43146 1447 aa7.96□□□□□ -1.13
LINC00550-202ENST00000629570 FAM135BQ49AJ0 1406 aa7.96□□□□□ -1.13
LINC00550-202ENST00000629570 SOX12O15370 315 aa7.96□□□□□ -1.14
LINC00550-202ENST00000629570 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.14
LINC00550-202ENST00000629570 SAFB2Q14151 953 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC00550-202ENST00000629570 TMEM92Q6UXU6 159 aa7.96□□□□□ -1.14
LINC00550-202ENST00000629570 MS4A4AQ96JQ5 239 aa7.96□□□□□ -1.14
LINC00550-202ENST00000629570 PRAM1Q96QH2 718 aa7.96□□□□□ -1.14
LINC00550-202ENST00000629570 ATF3P18847 181 aa7.95□□□□□ -1.14
LINC00550-202ENST00000629570 PHF8Q9UPP1 1060 aa7.95□□□□□ -1.14
LINC00550-202ENST00000629570 CDC42BPGQ6DT37 1551 aa7.95□□□□□ -1.14
LINC00550-202ENST00000629570 ROCK2O75116 1388 aaKnown RBP7.95□□□□□ -1.14
LINC00550-202ENST00000629570 ARHGEF28Q8N1W1 1705 aaKnown RBP7.95□□□□□ -1.14
LINC00550-202ENST00000629570 MST1RQ04912 1400 aa7.95□□□□□ -1.14
LINC00550-202ENST00000629570 RALGAPBQ86X10 1494 aa7.94□□□□□ -1.14
LINC00550-202ENST00000629570 CADPS2Q86UW7 1296 aa7.94□□□□□ -1.14
LINC00550-202ENST00000629570 SIRT1Q96EB6 747 aa7.94□□□□□ -1.14
LINC00550-202ENST00000629570 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
LINC00550-202ENST00000629570 ROBO1Q9Y6N7 1651 aa7.94□□□□□ -1.14
LINC00550-202ENST00000629570 POGKQ9P215 609 aa7.93□□□□□ -1.14
LINC00550-202ENST00000629570 GPRASP1Q5JY77 1395 aa7.93□□□□□ -1.14
LINC00550-202ENST00000629570 ADGRB2O60241 1585 aa7.93□□□□□ -1.14
LINC00550-202ENST00000629570 HSPA1LP34931 641 aa7.92□□□□□ -1.14
LINC00550-202ENST00000629570 HIRIP3Q9BW71 556 aaPredicted RBP7.92□□□□□ -1.14
LINC00550-202ENST00000629570 MINK1Q8N4C8 1332 aaPredicted RBP7.92□□□□□ -1.14
LINC00550-202ENST00000629570 C1orf167Q5SNV9 1468 aa7.92□□□□□ -1.14
LINC00550-202ENST00000629570 NUTM2FA1L443 756 aa7.91□□□□□ -1.14
LINC00550-202ENST00000629570 RIMBP2O15034 1052 aa7.91□□□□□ -1.14
LINC00550-202ENST00000629570 BRINP3Q76B58 766 aa7.91□□□□□ -1.14
LINC00550-202ENST00000629570 ERBB3P21860 1342 aa7.91□□□□□ -1.14
LINC00550-202ENST00000629570 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
LINC00550-202ENST00000629570 CENPJQ9HC77 1338 aaPredicted RBP7.9□□□□□ -1.14
LINC00550-202ENST00000629570 CARD11Q9BXL7 1154 aa7.9□□□□□ -1.14
LINC00550-202ENST00000629570 TIMELESSQ9UNS1 1208 aa7.9□□□□□ -1.14
LINC00550-202ENST00000629570 QRICH2Q9H0J4 1663 aa7.89□□□□□ -1.15
LINC00550-202ENST00000629570 DDX17Q92841 729 aaKnown RBP7.89□□□□□ -1.15
LINC00550-202ENST00000629570 ORAI2Q96SN7 254 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms