RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
CHD2-217ENST00000629136 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
CHD2-217ENST00000629136 TRPC5Q9UL62 973 aaPredicted RBP15.48■□□□□ 0.07
CHD2-217ENST00000629136 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
CHD2-217ENST00000629136 TONSLQ96HA7 1378 aa15.48■□□□□ 0.07
CHD2-217ENST00000629136 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
CHD2-217ENST00000629136 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
CHD2-217ENST00000629136 PIK3C2AO00443 1686 aa15.46■□□□□ 0.07
CHD2-217ENST00000629136 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.06
CHD2-217ENST00000629136 ACEP12821 1306 aa15.45■□□□□ 0.06
CHD2-217ENST00000629136 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
CHD2-217ENST00000629136 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
CHD2-217ENST00000629136 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
CHD2-217ENST00000629136 SRPK2P78362 688 aaKnown RBP15.44■□□□□ 0.06
CHD2-217ENST00000629136 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
CHD2-217ENST00000629136 EP400Q96L91 3159 aa15.43■□□□□ 0.06
CHD2-217ENST00000629136 UNC5CLQ8IV45 518 aa15.43■□□□□ 0.06
CHD2-217ENST00000629136 LMO7Q8WWI1 1683 aa15.43■□□□□ 0.06
CHD2-217ENST00000629136 SBNO2Q9Y2G9 1366 aa15.42■□□□□ 0.06
CHD2-217ENST00000629136 PAK3O75914 559 aaPredicted RBP15.42■□□□□ 0.06
CHD2-217ENST00000629136 UPF1Q92900 1129 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD2-217ENST00000629136 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
CHD2-217ENST00000629136 USP6P35125 1406 aa15.41■□□□□ 0.06
CHD2-217ENST00000629136 USP54Q70EL1 1684 aa15.4■□□□□ 0.06
CHD2-217ENST00000629136 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
CHD2-217ENST00000629136 FAM83GA6ND36 823 aa15.39■□□□□ 0.05
CHD2-217ENST00000629136 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
CHD2-217ENST00000629136 SLIT3O75094 1523 aa15.38■□□□□ 0.05
CHD2-217ENST00000629136 SSH2Q76I76 1423 aa15.38■□□□□ 0.05
CHD2-217ENST00000629136 CARD11Q9BXL7 1154 aa15.38■□□□□ 0.05
CHD2-217ENST00000629136 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
CHD2-217ENST00000629136 VPS72Q15906 364 aa15.37■□□□□ 0.05
CHD2-217ENST00000629136 CABP1Q9NZU7 370 aa15.37■□□□□ 0.05
CHD2-217ENST00000629136 USP19O94966 1318 aa15.37■□□□□ 0.05
CHD2-217ENST00000629136 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
CHD2-217ENST00000629136 KIAA0232Q92628 1395 aa15.36■□□□□ 0.05
CHD2-217ENST00000629136 NUTM2GQ5VZR2 741 aa15.36■□□□□ 0.05
CHD2-217ENST00000629136 RGPD5Q99666 1765 aa15.36■□□□□ 0.05
CHD2-217ENST00000629136 COL18A1P39060 1754 aa15.35■□□□□ 0.05
CHD2-217ENST00000629136 BTG4Q9NY30 223 aa15.35■□□□□ 0.05
CHD2-217ENST00000629136 WNK3Q9BYP7 1800 aa15.35■□□□□ 0.05
CHD2-217ENST00000629136 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
CHD2-217ENST00000629136 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
CHD2-217ENST00000629136 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
CHD2-217ENST00000629136 CAMTA1Q9Y6Y1 1673 aa15.34■□□□□ 0.05
CHD2-217ENST00000629136 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
CHD2-217ENST00000629136 LTN1O94822 1766 aa15.32■□□□□ 0.04
CHD2-217ENST00000629136 CPDO75976 1380 aa15.32■□□□□ 0.04
CHD2-217ENST00000629136 ZC3H6P61129 1189 aaKnown RBP15.31■□□□□ 0.04
CHD2-217ENST00000629136 CHRNA2Q15822 529 aa15.31■□□□□ 0.04
CHD2-217ENST00000629136 CCDC9Q9Y3X0 531 aaKnown RBP15.31■□□□□ 0.04
CHD2-217ENST00000629136 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
CHD2-217ENST00000629136 NFAT5O94916 1531 aa15.3■□□□□ 0.04
CHD2-217ENST00000629136 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 TNS1Q9HBL0 1735 aaKnown RBP15.29■□□□□ 0.04
CHD2-217ENST00000629136 PARP4Q9UKK3 1724 aaKnown RBP15.29■□□□□ 0.04
CHD2-217ENST00000629136 MYOM1P52179 1685 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 SPATA31A5Q5VU36 1347 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 SPATA31A7Q8IWB4 1347 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 NLRP13Q86W25 1043 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
CHD2-217ENST00000629136 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
CHD2-217ENST00000629136 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
CHD2-217ENST00000629136 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
CHD2-217ENST00000629136 PCGF6Q9BYE7 350 aa15.28■□□□□ 0.04
CHD2-217ENST00000629136 TTC21BQ7Z4L5 1316 aa15.27■□□□□ 0.04
CHD2-217ENST00000629136 GCP02774 474 aa15.27■□□□□ 0.04
CHD2-217ENST00000629136 TESK2Q96S53 571 aa15.27■□□□□ 0.04
CHD2-217ENST00000629136 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
CHD2-217ENST00000629136 NLRP6P59044 892 aa15.26■□□□□ 0.03
CHD2-217ENST00000629136 FAM98CQ17RN3 349 aaKnown RBP15.26■□□□□ 0.03
CHD2-217ENST00000629136 USP47Q96K76 1375 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 SPATA31A1Q5TZJ5 1347 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 ST20-MTHFSA0A0A6YYL1 179 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 ABCC6O95255 1503 aa15.25■□□□□ 0.03
CHD2-217ENST00000629136 A0A1W2PP64 1363 aa15.24■□□□□ 0.03
CHD2-217ENST00000629136 STRN4Q9NRL3 753 aa15.24■□□□□ 0.03
CHD2-217ENST00000629136 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
CHD2-217ENST00000629136 EDC4Q6P2E9 1401 aaKnown RBP15.24■□□□□ 0.03
CHD2-217ENST00000629136 KIF20BQ96Q89 1820 aa15.24■□□□□ 0.03
CHD2-217ENST00000629136 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
CHD2-217ENST00000629136 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
CHD2-217ENST00000629136 PUS7Q96PZ0 661 aaKnown RBP15.22■□□□□ 0.03
CHD2-217ENST00000629136 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
CHD2-217ENST00000629136 OVOS2A0A0J9YW53 1432 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 CRB1P82279 1406 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 OVOS2Q6IE36 1432 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 A0A0G2JS52 829 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 MYT1Q01538 1121 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.03
CHD2-217ENST00000629136 TMC1Q8TDI8 760 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 SLC12A5Q9H2X9 1139 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
CHD2-217ENST00000629136 NINLQ9Y2I6 1382 aa15.21■□□□□ 0.02
CHD2-217ENST00000629136 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
CHD2-217ENST00000629136 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
CHD2-217ENST00000629136 CCDC125Q86Z20 511 aa15.19■□□□□ 0.02
CHD2-217ENST00000629136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■□□□ 13.2
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms