RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
TCF4-258ENST00000627320 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
TCF4-258ENST00000627320 SAFB2Q14151 953 aaKnown RBP eCLIP13.08□□□□□ -0.32
TCF4-258ENST00000627320 SLC4A1APQ9BWU0 796 aaKnown RBP13.08□□□□□ -0.32
TCF4-258ENST00000627320 PDGFDQ9GZP0 370 aaPredicted RBP13.08□□□□□ -0.32
TCF4-258ENST00000627320 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
TCF4-258ENST00000627320 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
TCF4-258ENST00000627320 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
TCF4-258ENST00000627320 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
TCF4-258ENST00000627320 APBA3O96018 575 aa13.06□□□□□ -0.32
TCF4-258ENST00000627320 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
TCF4-258ENST00000627320 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
TCF4-258ENST00000627320 CHRNA2Q15822 529 aa13.04□□□□□ -0.32
TCF4-258ENST00000627320 ZNF784Q8NCA9 323 aaPredicted RBP13.04□□□□□ -0.32
TCF4-258ENST00000627320 PEAK1Q9H792 1746 aa13.04□□□□□ -0.32
TCF4-258ENST00000627320 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
TCF4-258ENST00000627320 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
TCF4-258ENST00000627320 WNK3Q9BYP7 1800 aa13.02□□□□□ -0.32
TCF4-258ENST00000627320 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
TCF4-258ENST00000627320 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.33
TCF4-258ENST00000627320 USP35Q9P2H5 1018 aa13.02□□□□□ -0.33
TCF4-258ENST00000627320 ARHGEF10O15013 1369 aa13.02□□□□□ -0.33
TCF4-258ENST00000627320 ABCC11Q96J66 1382 aa13.02□□□□□ -0.33
TCF4-258ENST00000627320 PSME1Q06323 249 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 PTF1AQ7RTS3 328 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 STRN4Q9NRL3 753 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 SPATA31A1Q5TZJ5 1347 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 PRR36Q9H6K5 1346 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
TCF4-258ENST00000627320 PARP4Q9UKK3 1724 aaKnown RBP13.01□□□□□ -0.33
TCF4-258ENST00000627320 LMO7Q8WWI1 1683 aa13□□□□□ -0.33
TCF4-258ENST00000627320 LRRC37A3O60309 1634 aa13□□□□□ -0.33
TCF4-258ENST00000627320 IFFO2Q5TF58 517 aa13□□□□□ -0.33
TCF4-258ENST00000627320 RGPD3A6NKT7 1758 aaPredicted RBP12.99□□□□□ -0.33
TCF4-258ENST00000627320 RGPD4Q7Z3J3 1758 aa12.99□□□□□ -0.33
TCF4-258ENST00000627320 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
TCF4-258ENST00000627320 NINLQ9Y2I6 1382 aa12.99□□□□□ -0.33
TCF4-258ENST00000627320 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
TCF4-258ENST00000627320 KCNQ2O43526 872 aa12.99□□□□□ -0.33
TCF4-258ENST00000627320 HIRIP3Q9BW71 556 aaPredicted RBP12.99□□□□□ -0.33
TCF4-258ENST00000627320 SPON1Q9HCB6 807 aa12.98□□□□□ -0.33
TCF4-258ENST00000627320 NUTM2GQ5VZR2 741 aa12.97□□□□□ -0.33
TCF4-258ENST00000627320 AKAP12Q02952 1782 aa12.97□□□□□ -0.33
TCF4-258ENST00000627320 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
TCF4-258ENST00000627320 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
TCF4-258ENST00000627320 PRAM1Q96QH2 718 aa12.96□□□□□ -0.33
TCF4-258ENST00000627320 PRDM11Q9NQV5 511 aa12.96□□□□□ -0.33
TCF4-258ENST00000627320 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
TCF4-258ENST00000627320 CEP350Q5VT06 3117 aa12.96□□□□□ -0.34
TCF4-258ENST00000627320 ITSN1Q15811 1721 aa12.96□□□□□ -0.34
TCF4-258ENST00000627320 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
TCF4-258ENST00000627320 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
TCF4-258ENST00000627320 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
TCF4-258ENST00000627320 SSH2Q76I76 1423 aa12.95□□□□□ -0.34
TCF4-258ENST00000627320 PARD3Q8TEW0 1356 aa12.94□□□□□ -0.34
TCF4-258ENST00000627320 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
TCF4-258ENST00000627320 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
TCF4-258ENST00000627320 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
TCF4-258ENST00000627320 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
TCF4-258ENST00000627320 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
TCF4-258ENST00000627320 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
TCF4-258ENST00000627320 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
TCF4-258ENST00000627320 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
TCF4-258ENST00000627320 ANKARQ7Z5J8 1434 aa12.93□□□□□ -0.34
TCF4-258ENST00000627320 ADGRB1O14514 1584 aa12.93□□□□□ -0.34
TCF4-258ENST00000627320 ARHGEF28Q8N1W1 1705 aaKnown RBP12.93□□□□□ -0.34
TCF4-258ENST00000627320 PTGER2P43116 358 aa12.92□□□□□ -0.34
TCF4-258ENST00000627320 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
TCF4-258ENST00000627320 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
TCF4-258ENST00000627320 TUBGCP6Q96RT7 1819 aa12.91□□□□□ -0.34
TCF4-258ENST00000627320 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
TCF4-258ENST00000627320 DLC1Q96QB1 1528 aa12.91□□□□□ -0.34
TCF4-258ENST00000627320 FHDC1Q9C0D6 1143 aaPredicted RBP12.9□□□□□ -0.34
TCF4-258ENST00000627320 PDE3BQ13370 1112 aa12.89□□□□□ -0.35
TCF4-258ENST00000627320 PROM2Q8N271 834 aa12.89□□□□□ -0.35
TCF4-258ENST00000627320 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
TCF4-258ENST00000627320 ATP7BP35670 1465 aa12.89□□□□□ -0.35
TCF4-258ENST00000627320 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
TCF4-258ENST00000627320 GOLGB1Q14789 3259 aaKnown RBP12.87□□□□□ -0.35
TCF4-258ENST00000627320 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
TCF4-258ENST00000627320 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
TCF4-258ENST00000627320 PAPPAQ13219 1627 aa12.87□□□□□ -0.35
TCF4-258ENST00000627320 COL18A1P39060 1754 aa12.86□□□□□ -0.35
TCF4-258ENST00000627320 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
TCF4-258ENST00000627320 SYT17Q9BSW7 474 aa12.86□□□□□ -0.35
TCF4-258ENST00000627320 POGKQ9P215 609 aa12.86□□□□□ -0.35
TCF4-258ENST00000627320 TRAK1Q9UPV9 953 aa12.86□□□□□ -0.35
TCF4-258ENST00000627320 DHX57Q6P158 1386 aaKnown RBP12.85□□□□□ -0.35
TCF4-258ENST00000627320 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
TCF4-258ENST00000627320 NGDNQ8NEJ9 315 aaKnown RBP12.84□□□□□ -0.35
TCF4-258ENST00000627320 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
TCF4-258ENST00000627320 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
TCF4-258ENST00000627320 OVOS2A0A0J9YW53 1432 aa12.84□□□□□ -0.35
TCF4-258ENST00000627320 OVOS2Q6IE36 1432 aa12.84□□□□□ -0.35
TCF4-258ENST00000627320 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
TCF4-258ENST00000627320 EVA1CP58658 441 aa12.83□□□□□ -0.36
TCF4-258ENST00000627320 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
TCF4-258ENST00000627320 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
TCF4-258ENST00000627320 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
TCF4-258ENST00000627320 BTAF1O14981 1849 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms