RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 NECTIN2Q92692 538 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
CHD2-205ENST00000625662 NBPF1Q3BBV0 1214 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 NAIPQ13075 1403 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 UBTFL1P0CB47 393 aaPredicted RBP14.43□□□□□ -0.1
CHD2-205ENST00000625662 TRDNQ13061 729 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 WAPLQ7Z5K2 1190 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 TBC1D2BQ9UPU7 963 aa14.43□□□□□ -0.1
CHD2-205ENST00000625662 MFAP1P55081 439 aaKnown RBP14.42□□□□□ -0.1
CHD2-205ENST00000625662 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
CHD2-205ENST00000625662 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
CHD2-205ENST00000625662 TTC21AQ8NDW8 1320 aa14.42□□□□□ -0.1
CHD2-205ENST00000625662 A0A087WZG4 1122 aa14.42□□□□□ -0.1
CHD2-205ENST00000625662 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
CHD2-205ENST00000625662 C14orf93Q9H972 538 aaKnown RBP14.41□□□□□ -0.1
CHD2-205ENST00000625662 RASSF8Q8NHQ8 419 aa14.41□□□□□ -0.1
CHD2-205ENST00000625662 SYCP2Q9BX26 1530 aa14.41□□□□□ -0.1
CHD2-205ENST00000625662 NOS1P29475 1434 aa14.41□□□□□ -0.1
CHD2-205ENST00000625662 ERICH2A1L162 156 aa14.4□□□□□ -0.1
CHD2-205ENST00000625662 HSPA2P54652 639 aa14.4□□□□□ -0.1
CHD2-205ENST00000625662 HSP90AB3PQ58FF7 597 aa14.4□□□□□ -0.1
CHD2-205ENST00000625662 BCL11BQ9C0K0 894 aaPredicted RBP14.4□□□□□ -0.1
CHD2-205ENST00000625662 CSPP1Q1MSJ5 1256 aa14.4□□□□□ -0.1
CHD2-205ENST00000625662 ERC1Q8IUD2 1116 aa14.4□□□□□ -0.1
CHD2-205ENST00000625662 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
CHD2-205ENST00000625662 CHAF1AQ13111 956 aaPredicted RBP14.39□□□□□ -0.11
CHD2-205ENST00000625662 L1TD1Q5T7N2 865 aaKnown RBP14.39□□□□□ -0.11
CHD2-205ENST00000625662 TBX22Q9Y458 520 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 TTC21BQ7Z4L5 1316 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 APPP05067 770 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 HDGFL1Q5TGJ6 251 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
CHD2-205ENST00000625662 SMARCC1Q92922 1105 aaPredicted RBP14.39□□□□□ -0.11
CHD2-205ENST00000625662 NCKAP5LQ9HCH0 1330 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 C11orf95C9JLR9 678 aaPredicted RBP14.39□□□□□ -0.11
CHD2-205ENST00000625662 AK7Q96M32 723 aa14.39□□□□□ -0.11
CHD2-205ENST00000625662 RNF20Q5VTR2 975 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 RAD21O60216 631 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 FCHSD2O94868 740 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
CHD2-205ENST00000625662 CNNM1Q9NRU3 951 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 ZFYVE16Q7Z3T8 1539 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
CHD2-205ENST00000625662 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
CHD2-205ENST00000625662 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
CHD2-205ENST00000625662 AMER1Q5JTC6 1135 aaPredicted RBP14.37□□□□□ -0.11
CHD2-205ENST00000625662 NSD2O96028 1365 aa14.37□□□□□ -0.11
CHD2-205ENST00000625662 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
CHD2-205ENST00000625662 PPP2R1AP30153 589 aa14.37□□□□□ -0.11
CHD2-205ENST00000625662 TMOD2Q9NZR1 351 aa14.37□□□□□ -0.11
CHD2-205ENST00000625662 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
CHD2-205ENST00000625662 DHX16O60231 1041 aaKnown RBP14.36□□□□□ -0.11
CHD2-205ENST00000625662 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
CHD2-205ENST00000625662 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 C8orf37Q96NL8 207 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
CHD2-205ENST00000625662 KCNA6P17658 529 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 NEUROD6Q96NK8 337 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 CCDC27Q2M243 656 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 TRAPPC8Q9Y2L5 1435 aa14.36□□□□□ -0.11
CHD2-205ENST00000625662 ABCA5Q8WWZ7 1642 aa14.35□□□□□ -0.11
CHD2-205ENST00000625662 POLD1P28340 1107 aa14.35□□□□□ -0.11
CHD2-205ENST00000625662 RILPL2Q969X0 211 aa14.35□□□□□ -0.11
CHD2-205ENST00000625662 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
CHD2-205ENST00000625662 ST18O60284 1047 aa14.35□□□□□ -0.11
CHD2-205ENST00000625662 SCAF11Q99590 1463 aaKnown RBP14.35□□□□□ -0.11
CHD2-205ENST00000625662 CALRP27797 417 aaKnown RBP14.34□□□□□ -0.11
CHD2-205ENST00000625662 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
CHD2-205ENST00000625662 KIAA2012Q0VF49 1180 aa14.34□□□□□ -0.11
CHD2-205ENST00000625662 IFNL2Q8IZJ0 200 aa14.34□□□□□ -0.11
CHD2-205ENST00000625662 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
CHD2-205ENST00000625662 CCDC158Q5M9N0 1113 aa14.33□□□□□ -0.11
CHD2-205ENST00000625662 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.11
CHD2-205ENST00000625662 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.11
CHD2-205ENST00000625662 ADGRF5Q8IZF2 1346 aa14.33□□□□□ -0.12
CHD2-205ENST00000625662 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
CHD2-205ENST00000625662 TPM4P67936 248 aa14.33□□□□□ -0.12
CHD2-205ENST00000625662 TRIM29Q14134 588 aa14.33□□□□□ -0.12
CHD2-205ENST00000625662 NAP1L5Q96NT1 182 aaPredicted RBP14.33□□□□□ -0.12
CHD2-205ENST00000625662 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 TRPM2O94759 1503 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
CHD2-205ENST00000625662 TWISTNBQ3B726 338 aaPredicted RBP14.32□□□□□ -0.12
CHD2-205ENST00000625662 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
CHD2-205ENST00000625662 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.124e-7■■□□□ 11.9
CHD2-205ENST00000625662 MAGI2Q86UL8 1455 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 ZBED9Q6R2W3 1325 aa14.32□□□□□ -0.12
CHD2-205ENST00000625662 PLIN1O60240 522 aa14.31□□□□□ -0.12
CHD2-205ENST00000625662 REC8O95072 547 aa14.31□□□□□ -0.12
CHD2-205ENST00000625662 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
CHD2-205ENST00000625662 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
CHD2-205ENST00000625662 HIP1O00291 1037 aa14.3□□□□□ -0.12
CHD2-205ENST00000625662 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
CHD2-205ENST00000625662 CCDC43Q96MW1 224 aaKnown RBP14.3□□□□□ -0.12
CHD2-205ENST00000625662 SRCIN1Q9C0H9 1055 aa14.3□□□□□ -0.12
CHD2-205ENST00000625662 DEKP35659 375 aaKnown RBP14.3□□□□□ -0.12
CHD2-205ENST00000625662 DDB1Q16531 1140 aa14.3□□□□□ -0.12
CHD2-205ENST00000625662 WASHC4Q2M389 1173 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms