RNA–Protein interactions for RNA: ENST00000624644.1

LINC00424-202, long intergenic non-protein coding RNA 424, humanhuman

TSL 3

Gene LINC00424, Length 453 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00424-202ENST00000624644 PRDM11Q9NQV5 511 aa17.23■□□□□ 0.35
LINC00424-202ENST00000624644 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
LINC00424-202ENST00000624644 IFT172Q9UG01 1749 aa17.22■□□□□ 0.35
LINC00424-202ENST00000624644 TRIM37O94972 964 aa17.22■□□□□ 0.35
LINC00424-202ENST00000624644 SPATA31A1Q5TZJ5 1347 aa17.21■□□□□ 0.35
LINC00424-202ENST00000624644 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
LINC00424-202ENST00000624644 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
LINC00424-202ENST00000624644 DLC1Q96QB1 1528 aa17.21■□□□□ 0.34
LINC00424-202ENST00000624644 EIF3AQ14152 1382 aaKnown RBP17.2■□□□□ 0.34
LINC00424-202ENST00000624644 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
LINC00424-202ENST00000624644 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
LINC00424-202ENST00000624644 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
LINC00424-202ENST00000624644 NRAPQ86VF7 1730 aa17.2■□□□□ 0.34
LINC00424-202ENST00000624644 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
LINC00424-202ENST00000624644 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
LINC00424-202ENST00000624644 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
LINC00424-202ENST00000624644 APBA3O96018 575 aa17.19■□□□□ 0.34
LINC00424-202ENST00000624644 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
LINC00424-202ENST00000624644 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
LINC00424-202ENST00000624644 CHRNA2Q15822 529 aa17.17■□□□□ 0.34
LINC00424-202ENST00000624644 YY1P25490 414 aa17.16■□□□□ 0.34
LINC00424-202ENST00000624644 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
LINC00424-202ENST00000624644 THSD7AQ9UPZ6 1657 aa17.16■□□□□ 0.34
LINC00424-202ENST00000624644 RGPD1P0DJD0 1748 aa17.16■□□□□ 0.34
LINC00424-202ENST00000624644 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
LINC00424-202ENST00000624644 ADGRB2O60241 1585 aa17.15■□□□□ 0.34
LINC00424-202ENST00000624644 BARGINQ6ZT62 677 aa17.15■□□□□ 0.34
LINC00424-202ENST00000624644 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
LINC00424-202ENST00000624644 PDE3BQ13370 1112 aa17.14■□□□□ 0.33
LINC00424-202ENST00000624644 NBPF8Q3BBV2 869 aa17.14■□□□□ 0.33
LINC00424-202ENST00000624644 NBPF14Q5TI25 921 aa17.14■□□□□ 0.33
LINC00424-202ENST00000624644 TULP4Q9NRJ4 1543 aa17.14■□□□□ 0.33
LINC00424-202ENST00000624644 EVA1CP58658 441 aa17.13■□□□□ 0.33
LINC00424-202ENST00000624644 ZC3H6P61129 1189 aaKnown RBP17.13■□□□□ 0.33
LINC00424-202ENST00000624644 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
LINC00424-202ENST00000624644 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
LINC00424-202ENST00000624644 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
LINC00424-202ENST00000624644 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
LINC00424-202ENST00000624644 SPON1Q9HCB6 807 aa17.1■□□□□ 0.33
LINC00424-202ENST00000624644 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
LINC00424-202ENST00000624644 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
LINC00424-202ENST00000624644 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
LINC00424-202ENST00000624644 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
LINC00424-202ENST00000624644 SSH2Q76I76 1423 aa17.08■□□□□ 0.32
LINC00424-202ENST00000624644 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
LINC00424-202ENST00000624644 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
LINC00424-202ENST00000624644 KCNQ2O43526 872 aa17.07■□□□□ 0.32
LINC00424-202ENST00000624644 PPP1R1BQ9UD71 204 aaPredicted RBP17.07■□□□□ 0.32
LINC00424-202ENST00000624644 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
LINC00424-202ENST00000624644 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
LINC00424-202ENST00000624644 ATP7BP35670 1465 aa17.05■□□□□ 0.32
LINC00424-202ENST00000624644 POLR3AO14802 1390 aaPredicted RBP17.05■□□□□ 0.32
LINC00424-202ENST00000624644 CRYBG1Q9Y4K1 1723 aa17.05■□□□□ 0.32
LINC00424-202ENST00000624644 ACEP12821 1306 aa17.05■□□□□ 0.32
LINC00424-202ENST00000624644 DCAF8L1A6NGE4 600 aa17.05■□□□□ 0.32
LINC00424-202ENST00000624644 C11orf95C9JLR9 678 aaPredicted RBP17.05■□□□□ 0.32
LINC00424-202ENST00000624644 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
LINC00424-202ENST00000624644 CPDO75976 1380 aa17.04■□□□□ 0.32
LINC00424-202ENST00000624644 PLEKHG3A1L390 1219 aa17.04■□□□□ 0.32
LINC00424-202ENST00000624644 ABTB2Q8N961 1025 aa17.04■□□□□ 0.32
LINC00424-202ENST00000624644 NINLQ9Y2I6 1382 aa17.03■□□□□ 0.32
LINC00424-202ENST00000624644 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.32
LINC00424-202ENST00000624644 USP19O94966 1318 aa17.01■□□□□ 0.31
LINC00424-202ENST00000624644 GCP02774 474 aa17.01■□□□□ 0.31
LINC00424-202ENST00000624644 UTRNP46939 3433 aa17.01■□□□□ 0.31
LINC00424-202ENST00000624644 PLSCR1O15162 318 aa17■□□□□ 0.31
LINC00424-202ENST00000624644 NLRP13Q86W25 1043 aa17■□□□□ 0.31
LINC00424-202ENST00000624644 RREB1Q92766 1687 aa16.98■□□□□ 0.31
LINC00424-202ENST00000624644 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.31
LINC00424-202ENST00000624644 NUP188Q5SRE5 1749 aa16.96■□□□□ 0.31
LINC00424-202ENST00000624644 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
LINC00424-202ENST00000624644 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
LINC00424-202ENST00000624644 RAB3GAP2Q9H2M9 1393 aa16.96■□□□□ 0.31
LINC00424-202ENST00000624644 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
LINC00424-202ENST00000624644 OVOS2A0A0J9YW53 1432 aa16.96■□□□□ 0.3
LINC00424-202ENST00000624644 OVOS2Q6IE36 1432 aa16.96■□□□□ 0.3
LINC00424-202ENST00000624644 COL5A2P05997 1499 aaPredicted RBP16.95■□□□□ 0.3
LINC00424-202ENST00000624644 DDB1Q16531 1140 aa16.95■□□□□ 0.3
LINC00424-202ENST00000624644 CRB1P82279 1406 aa16.95■□□□□ 0.3
LINC00424-202ENST00000624644 PTF1AQ7RTS3 328 aa16.94■□□□□ 0.3
LINC00424-202ENST00000624644 PROM2Q8N271 834 aa16.94■□□□□ 0.3
LINC00424-202ENST00000624644 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
LINC00424-202ENST00000624644 PDGFDQ9GZP0 370 aaPredicted RBP16.93■□□□□ 0.3
LINC00424-202ENST00000624644 LMO7Q8WWI1 1683 aa16.93■□□□□ 0.3
LINC00424-202ENST00000624644 AATKQ6ZMQ8 1374 aa16.92■□□□□ 0.3
LINC00424-202ENST00000624644 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
LINC00424-202ENST00000624644 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
LINC00424-202ENST00000624644 ZBTB7AO95365 584 aa16.91■□□□□ 0.3
LINC00424-202ENST00000624644 PTGER2P43116 358 aa16.91■□□□□ 0.3
LINC00424-202ENST00000624644 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
LINC00424-202ENST00000624644 ZNF784Q8NCA9 323 aaPredicted RBP16.91■□□□□ 0.3
LINC00424-202ENST00000624644 ZBTB7CA1YPR0 619 aa16.9■□□□□ 0.3
LINC00424-202ENST00000624644 NLRP6P59044 892 aa16.9■□□□□ 0.3
LINC00424-202ENST00000624644 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
LINC00424-202ENST00000624644 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
LINC00424-202ENST00000624644 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
LINC00424-202ENST00000624644 BCL9O00512 1426 aa16.88■□□□□ 0.29
LINC00424-202ENST00000624644 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
LINC00424-202ENST00000624644 ARHGEF28Q8N1W1 1705 aaKnown RBP16.88■□□□□ 0.29
LINC00424-202ENST00000624644 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms