RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 IL27Q8NEV9 243 aa12.69□□□□□ -0.38
TARDBP-224ENST00000621573 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
TARDBP-224ENST00000621573 CCDC18Q5T9S5 1454 aa12.69□□□□□ -0.38
TARDBP-224ENST00000621573 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
TARDBP-224ENST00000621573 GLI2P10070 1586 aa12.69□□□□□ -0.38
TARDBP-224ENST00000621573 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
TARDBP-224ENST00000621573 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
TARDBP-224ENST00000621573 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
TARDBP-224ENST00000621573 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
TARDBP-224ENST00000621573 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
TARDBP-224ENST00000621573 USP46P62068 366 aa12.65□□□□□ -0.38
TARDBP-224ENST00000621573 PCDHB3Q9Y5E6 796 aa12.65□□□□□ -0.38
TARDBP-224ENST00000621573 MTUS2Q5JR59 1369 aa12.65□□□□□ -0.38
TARDBP-224ENST00000621573 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
TARDBP-224ENST00000621573 HOXA2O43364 376 aa12.63□□□□□ -0.39
TARDBP-224ENST00000621573 DIXDC1Q155Q3 683 aa12.63□□□□□ -0.39
TARDBP-224ENST00000621573 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
TARDBP-224ENST00000621573 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
TARDBP-224ENST00000621573 HLA-CQ95604 372 aa12.62□□□□□ -0.39
TARDBP-224ENST00000621573 MOXD2PA6NHM9 499 aa12.61□□□□□ -0.39
TARDBP-224ENST00000621573 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
TARDBP-224ENST00000621573 MORN1Q5T089 497 aa12.61□□□□□ -0.39
TARDBP-224ENST00000621573 MYSM1Q5VVJ2 828 aa12.61□□□□□ -0.39
TARDBP-224ENST00000621573 BLOC1S3Q6QNY0 202 aa12.61□□□□□ -0.39
TARDBP-224ENST00000621573 MAP3K4Q9Y6R4 1608 aa12.6□□□□□ -0.39
TARDBP-224ENST00000621573 NDUFV2P19404 249 aa12.6□□□□□ -0.39
TARDBP-224ENST00000621573 MTRQ99707 1265 aa12.6□□□□□ -0.39
TARDBP-224ENST00000621573 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
TARDBP-224ENST00000621573 MAGI3Q5TCQ9 1506 aa12.6□□□□□ -0.39
TARDBP-224ENST00000621573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.59□□□□□ -0.39
TARDBP-224ENST00000621573 COPS2P61201 443 aa12.59□□□□□ -0.39
TARDBP-224ENST00000621573 TJAP1Q5JTD0 557 aa12.59□□□□□ -0.39
TARDBP-224ENST00000621573 ABCA9Q8IUA7 1624 aa12.59□□□□□ -0.39
TARDBP-224ENST00000621573 GUCA2AQ02747 115 aa12.58□□□□□ -0.4
TARDBP-224ENST00000621573 EFCAB2Q5VUJ9 269 aa12.58□□□□□ -0.4
TARDBP-224ENST00000621573 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
TARDBP-224ENST00000621573 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
TARDBP-224ENST00000621573 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
TARDBP-224ENST00000621573 KANK4Q5T7N3 995 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-224ENST00000621573 SCUBE3Q8IX30 993 aa12.57□□□□□ -0.4
TARDBP-224ENST00000621573 SLC27A5Q9Y2P5 690 aa12.57□□□□□ -0.4
TARDBP-224ENST00000621573 KIF14Q15058 1648 aa12.57□□□□□ -0.4
TARDBP-224ENST00000621573 PLCH2O75038 1416 aa12.56□□□□□ -0.4
TARDBP-224ENST00000621573 RSBN1LQ6PCB5 846 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-224ENST00000621573 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
TARDBP-224ENST00000621573 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
TARDBP-224ENST00000621573 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
TARDBP-224ENST00000621573 CCNB3Q8WWL7 1395 aa12.56□□□□□ -0.4
TARDBP-224ENST00000621573 SPTLC1O15269 473 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 NR1I2O75469 434 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 FDX1P10109 184 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 IL21Q9HBE4 155 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 ZNF777Q9ULD5 760 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-224ENST00000621573 TTC37Q6PGP7 1564 aa12.55□□□□□ -0.4
TARDBP-224ENST00000621573 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
TARDBP-224ENST00000621573 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
TARDBP-224ENST00000621573 ZNF516Q92618 1163 aa12.54□□□□□ -0.4
TARDBP-224ENST00000621573 CFDP1Q9UEE9 299 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-224ENST00000621573 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
TARDBP-224ENST00000621573 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
TARDBP-224ENST00000621573 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
TARDBP-224ENST00000621573 FANCAO15360 1455 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 EHBP1L1Q8N3D4 1523 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 ITGBL1O95965 494 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-224ENST00000621573 GJA5P36382 358 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
TARDBP-224ENST00000621573 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 NEO1Q92859 1461 aa12.53□□□□□ -0.4
TARDBP-224ENST00000621573 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-224ENST00000621573 MAP3K1Q13233 1512 aa12.52□□□□□ -0.4
TARDBP-224ENST00000621573 KDM6BO15054 1643 aa12.52□□□□□ -0.4
TARDBP-224ENST00000621573 ZPR1O75312 459 aa12.52□□□□□ -0.41
TARDBP-224ENST00000621573 RAPGEF3O95398 923 aa12.52□□□□□ -0.41
TARDBP-224ENST00000621573 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
TARDBP-224ENST00000621573 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.41
TARDBP-224ENST00000621573 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-224ENST00000621573 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
TARDBP-224ENST00000621573 GPATCH8Q9UKJ3 1502 aaKnown RBP12.49□□□□□ -0.41
TARDBP-224ENST00000621573 NCOA2Q15596 1464 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 TLL1O43897 1013 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 KCNC4Q03721 635 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 TMEM132AQ24JP5 1023 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 RNF19BQ6ZMZ0 732 aa12.49□□□□□ -0.41
TARDBP-224ENST00000621573 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-224ENST00000621573 ARAP3Q8WWN8 1544 aa12.48□□□□□ -0.41
TARDBP-224ENST00000621573 DENND4BO75064 1496 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-224ENST00000621573 ADGRL1O94910 1474 aa12.48□□□□□ -0.41
TARDBP-224ENST00000621573 CSPP1Q1MSJ5 1256 aa12.48□□□□□ -0.41
TARDBP-224ENST00000621573 Q3C1V9 767 aa12.48□□□□□ -0.41
TARDBP-224ENST00000621573 BRICD5Q6PL45 260 aa12.48□□□□□ -0.41
TARDBP-224ENST00000621573 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
TARDBP-224ENST00000621573 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
TARDBP-224ENST00000621573 MYO5CQ9NQX4 1742 aa12.46□□□□□ -0.41
TARDBP-224ENST00000621573 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
TARDBP-224ENST00000621573 HNRNPMP52272 730 aaKnown RBP eCLIP12.46□□□□□ -0.41
TARDBP-224ENST00000621573 NKX2-3Q8TAU0 364 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms