RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 SOX12O15370 315 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 APPP05067 770 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 ZSCAN20P17040 1043 aaPredicted RBP6.53□□□□□ -1.36
MATR3-228ENST00000620916 NBPF11Q86T75 865 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 EGFL6Q8IUX8 553 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 ZHX1Q9UKY1 873 aaPredicted RBP6.53□□□□□ -1.36
MATR3-228ENST00000620916 SPAG9O60271 1321 aaKnown RBP6.53□□□□□ -1.36
MATR3-228ENST00000620916 VGLL3A8MV65 326 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 CC2D1BQ5T0F9 858 aaKnown RBP6.53□□□□□ -1.36
MATR3-228ENST00000620916 PRDM16Q9HAZ2 1276 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 TNRQ92752 1358 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 LRRC7Q96NW7 1537 aa6.53□□□□□ -1.36
MATR3-228ENST00000620916 NBPF1Q3BBV0 1214 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 IQGAP1P46940 1657 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 IQGAP3Q86VI3 1631 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 TCERG1O14776 1098 aaKnown RBP6.52□□□□□ -1.37
MATR3-228ENST00000620916 NFKBIBQ15653 356 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 CERS3Q8IU89 383 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 ZC3H15Q8WU90 426 aaKnown RBP6.52□□□□□ -1.37
MATR3-228ENST00000620916 TTC36A6NLP5 189 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 FAM212AQ96EL1 285 aa6.52□□□□□ -1.37
MATR3-228ENST00000620916 ANAPC15P60006 121 aa6.51□□□□□ -1.37
MATR3-228ENST00000620916 PIP4K2BP78356 416 aa6.51□□□□□ -1.37
MATR3-228ENST00000620916 IFT172Q9UG01 1749 aa6.51□□□□□ -1.37
MATR3-228ENST00000620916 CDK12Q9NYV4 1490 aaPredicted RBP6.51□□□□□ -1.37
MATR3-228ENST00000620916 DNTTIP2Q5QJE6 756 aaKnown RBP6.51□□□□□ -1.37
MATR3-228ENST00000620916 GPATCH11Q8N954 259 aa6.51□□□□□ -1.37
MATR3-228ENST00000620916 GPBP1L1Q9HC44 474 aaPredicted RBP6.51□□□□□ -1.37
MATR3-228ENST00000620916 PPP1R37O75864 691 aa6.5□□□□□ -1.37
MATR3-228ENST00000620916 RGS17Q9UGC6 210 aaPredicted RBP6.5□□□□□ -1.37
MATR3-228ENST00000620916 CREBZFQ9NS37 354 aa6.5□□□□□ -1.37
MATR3-228ENST00000620916 UGGT1Q9NYU2 1555 aa6.5□□□□□ -1.37
MATR3-228ENST00000620916 DHX29Q7Z478 1369 aaKnown RBP6.5□□□□□ -1.37
MATR3-228ENST00000620916 HSP90AB3PQ58FF7 597 aa6.5□□□□□ -1.37
MATR3-228ENST00000620916 LMTK2Q8IWU2 1503 aa6.49□□□□□ -1.37
MATR3-228ENST00000620916 WDR70Q9NW82 654 aa6.49□□□□□ -1.37
MATR3-228ENST00000620916 CAMSAP2Q08AD1 1489 aa6.49□□□□□ -1.37
MATR3-228ENST00000620916 ABCC3O15438 1527 aa6.48□□□□□ -1.37
MATR3-228ENST00000620916 TSPYL1Q9H0U9 437 aa6.48□□□□□ -1.37
MATR3-228ENST00000620916 PCDHB8Q9UN66 801 aa6.48□□□□□ -1.37
MATR3-228ENST00000620916 PCDHB13Q9Y5F0 798 aa6.48□□□□□ -1.37
MATR3-228ENST00000620916 SYCP2Q9BX26 1530 aa6.48□□□□□ -1.37
MATR3-228ENST00000620916 GPATCH8Q9UKJ3 1502 aaKnown RBP6.48□□□□□ -1.37
MATR3-228ENST00000620916 SH3BP1Q9Y3L3 701 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 FGD6Q6ZV73 1430 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 NCOA2Q15596 1464 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 SLIT1O75093 1534 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 NBPF9Q3BBW0 867 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 CCDC94Q9BW85 323 aaPredicted RBP6.47□□□□□ -1.37
MATR3-228ENST00000620916 RAI14Q9P0K7 980 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 NCOA3Q9Y6Q9 1424 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 RIPK4P57078 832 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 BSDC1Q9NW68 430 aaPredicted RBP6.47□□□□□ -1.37
MATR3-228ENST00000620916 ROCK1Q13464 1354 aa6.47□□□□□ -1.37
MATR3-228ENST00000620916 ARHGAP23Q9P227 1491 aa6.46□□□□□ -1.37
MATR3-228ENST00000620916 ESPNB1AK53 854 aa6.46□□□□□ -1.37
MATR3-228ENST00000620916 OS9Q13438 667 aaPredicted RBP6.46□□□□□ -1.37
MATR3-228ENST00000620916 ZBED9Q6R2W3 1325 aa6.46□□□□□ -1.38
MATR3-228ENST00000620916 ZNF772Q68DY9 489 aaPredicted RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 MFRPQ9BY79 579 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 EFCC1Q9HA90 598 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 SPATA31A6Q5VVP1 1343 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 PRDM15P57071 1507 aaPredicted RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 TMEM131LA2VDJ0 1609 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 TSPYL2Q9H2G4 693 aaPredicted RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 JCADQ9P266 1359 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 STRCP1A6NGW2 1772 aa6.45□□□□□ -1.38
MATR3-228ENST00000620916 NKTRP30414 1462 aaKnown RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 SCAF11Q99590 1463 aaKnown RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.45□□□□□ -1.384e-7■■□□□ 14.4
MATR3-228ENST00000620916 ISY1Q9ULR0 285 aaKnown RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 CFAP65Q6ZU64 1925 aaKnown RBP6.45□□□□□ -1.38
MATR3-228ENST00000620916 FSD2A1L4K1 749 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 IRX5P78411 483 aaPredicted RBP6.44□□□□□ -1.38
MATR3-228ENST00000620916 SATB1Q01826 763 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 POTEAQ6S8J7 498 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 NGEFQ8N5V2 710 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
MATR3-228ENST00000620916 USP54Q70EL1 1684 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 DYNC1I1O14576 645 aa6.44□□□□□ -1.38
MATR3-228ENST00000620916 NBPF10Q6P3W6 841 aaKnown RBP6.44□□□□□ -1.38
MATR3-228ENST00000620916 OFD1O75665 1012 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 MS4A1P11836 297 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 GGT6Q6P531 493 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
MATR3-228ENST00000620916 UPF1Q92900 1129 aaKnown RBP eCLIP6.43□□□□□ -1.38
MATR3-228ENST00000620916 MBD5Q9P267 1494 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 CEP152O94986 1710 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 ARHGAP31Q2M1Z3 1444 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 OTUD6BQ8N6M0 293 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 NWD1Q149M9 1564 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 PRR29P0C7W0 189 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 CASC1Q6TDU7 716 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 KIAA1211Q6ZU35 1233 aa6.43□□□□□ -1.38
MATR3-228ENST00000620916 PRAG1Q86YV5 1406 aa6.42□□□□□ -1.38
MATR3-228ENST00000620916 CCNB3Q8WWL7 1395 aa6.42□□□□□ -1.38
MATR3-228ENST00000620916 XIRP1Q702N8 1843 aaKnown RBP6.42□□□□□ -1.38
MATR3-228ENST00000620916 CHADLQ6NUI6 762 aa6.42□□□□□ -1.38
MATR3-228ENST00000620916 CFDP1Q9UEE9 299 aaPredicted RBP6.42□□□□□ -1.38
MATR3-228ENST00000620916 UBR1Q8IWV7 1749 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms