RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 FKBPLQ9UIM3 349 aa12.04□□□□□ -0.48
LPCAT3-213ENST00000620843 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
LPCAT3-213ENST00000620843 EVA1BQ9NVM1 165 aa12.03□□□□□ -0.48
LPCAT3-213ENST00000620843 KCNH2Q12809 1159 aa12.01□□□□□ -0.49
LPCAT3-213ENST00000620843 SLC6A16Q9GZN6 736 aa12.01□□□□□ -0.49
LPCAT3-213ENST00000620843 ZC3H4Q9UPT8 1303 aaKnown RBP11.99□□□□□ -0.49
LPCAT3-213ENST00000620843 FBXO45P0C2W1 286 aa11.98□□□□□ -0.49
LPCAT3-213ENST00000620843 NR1H3Q13133 447 aa11.98□□□□□ -0.49
LPCAT3-213ENST00000620843 CCDC24Q8N4L8 307 aa11.98□□□□□ -0.49
LPCAT3-213ENST00000620843 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
LPCAT3-213ENST00000620843 ALG2Q9H553 416 aa11.98□□□□□ -0.49
LPCAT3-213ENST00000620843 ZBBXA8MT70 800 aa11.97□□□□□ -0.49
LPCAT3-213ENST00000620843 SOX11P35716 441 aa11.97□□□□□ -0.49
LPCAT3-213ENST00000620843 S1PR4O95977 384 aa11.95□□□□□ -0.5
LPCAT3-213ENST00000620843 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
LPCAT3-213ENST00000620843 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
LPCAT3-213ENST00000620843 SEMA3FQ13275 785 aa11.94□□□□□ -0.5
LPCAT3-213ENST00000620843 PTCRAQ6ISU1 281 aaPredicted RBP11.94□□□□□ -0.5
LPCAT3-213ENST00000620843 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
LPCAT3-213ENST00000620843 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
LPCAT3-213ENST00000620843 HCSTQ9UBK5 93 aa11.94□□□□□ -0.5
LPCAT3-213ENST00000620843 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
LPCAT3-213ENST00000620843 PDXDC2PQ6P474 469 aa11.92□□□□□ -0.5
LPCAT3-213ENST00000620843 GPKOWQ92917 476 aaPredicted RBP eCLIP11.92□□□□□ -0.5
LPCAT3-213ENST00000620843 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
LPCAT3-213ENST00000620843 FCF1Q9Y324 198 aaKnown RBP11.91□□□□□ -0.5
LPCAT3-213ENST00000620843 PTK2Q05397 1052 aa11.9□□□□□ -0.5
LPCAT3-213ENST00000620843 UCN2Q96RP3 112 aa11.9□□□□□ -0.5
LPCAT3-213ENST00000620843 GPSM3Q9Y4H4 160 aa11.9□□□□□ -0.5
LPCAT3-213ENST00000620843 KCNC4Q03721 635 aa11.89□□□□□ -0.51
LPCAT3-213ENST00000620843 PPP1R12CQ9BZL4 782 aa11.89□□□□□ -0.51
LPCAT3-213ENST00000620843 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
LPCAT3-213ENST00000620843 OCSTAMPQ9BR26 566 aa11.88□□□□□ -0.51
LPCAT3-213ENST00000620843 ITGBL1O95965 494 aaPredicted RBP11.87□□□□□ -0.51
LPCAT3-213ENST00000620843 RFX1P22670 979 aa11.87□□□□□ -0.51
LPCAT3-213ENST00000620843 CFAP70Q5T0N1 1121 aa11.87□□□□□ -0.51
LPCAT3-213ENST00000620843 PALM3A6NDB9 673 aaPredicted RBP11.86□□□□□ -0.51
LPCAT3-213ENST00000620843 ARHGAP9Q9BRR9 750 aa11.86□□□□□ -0.51
LPCAT3-213ENST00000620843 PPEF1O14829 653 aaPredicted RBP11.85□□□□□ -0.51
LPCAT3-213ENST00000620843 BAP1Q92560 729 aa11.85□□□□□ -0.51
LPCAT3-213ENST00000620843 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
LPCAT3-213ENST00000620843 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
LPCAT3-213ENST00000620843 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
LPCAT3-213ENST00000620843 ADAM32Q8TC27 787 aa11.84□□□□□ -0.51
LPCAT3-213ENST00000620843 PCDHB9Q9Y5E1 797 aa11.84□□□□□ -0.51
LPCAT3-213ENST00000620843 PPP1R15AO75807 674 aaPredicted RBP11.83□□□□□ -0.52
LPCAT3-213ENST00000620843 TBC1D9Q6ZT07 1266 aa11.83□□□□□ -0.52
LPCAT3-213ENST00000620843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
LPCAT3-213ENST00000620843 LMOD1P29536 600 aaPredicted RBP11.82□□□□□ -0.52
LPCAT3-213ENST00000620843 ZBTB33Q86T24 672 aa11.82□□□□□ -0.52
LPCAT3-213ENST00000620843 CARD14Q9BXL6 1004 aa11.82□□□□□ -0.52
LPCAT3-213ENST00000620843 MAGEB6P1A0A0J9YX57 407 aa11.81□□□□□ -0.52
LPCAT3-213ENST00000620843 PIK3CDO00329 1044 aa11.81□□□□□ -0.52
LPCAT3-213ENST00000620843 ZNF511Q8NB15 262 aa11.81□□□□□ -0.52
LPCAT3-213ENST00000620843 PBXIP1Q96AQ6 731 aa11.81□□□□□ -0.52
LPCAT3-213ENST00000620843 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
LPCAT3-213ENST00000620843 AGERQ15109 404 aa11.8□□□□□ -0.52
LPCAT3-213ENST00000620843 ZNF592Q92610 1267 aa11.8□□□□□ -0.52
LPCAT3-213ENST00000620843 MAFBQ9Y5Q3 323 aaPredicted RBP11.8□□□□□ -0.52
LPCAT3-213ENST00000620843 ATP9BO43861 1147 aa11.79□□□□□ -0.52
LPCAT3-213ENST00000620843 GGCXP38435 758 aa11.79□□□□□ -0.52
LPCAT3-213ENST00000620843 SH3RF1Q7Z6J0 888 aa11.79□□□□□ -0.52
LPCAT3-213ENST00000620843 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
LPCAT3-213ENST00000620843 FOXJ1Q92949 421 aa11.79□□□□□ -0.52
LPCAT3-213ENST00000620843 PDIA4P13667 645 aaKnown RBP11.78□□□□□ -0.52
LPCAT3-213ENST00000620843 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
LPCAT3-213ENST00000620843 CEP126Q9P2H0 1117 aa11.78□□□□□ -0.52
LPCAT3-213ENST00000620843 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
LPCAT3-213ENST00000620843 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
LPCAT3-213ENST00000620843 ANKLE1Q8NAG6 615 aa11.77□□□□□ -0.53
LPCAT3-213ENST00000620843 RETREG2Q8NC44 543 aa11.77□□□□□ -0.53
LPCAT3-213ENST00000620843 ACIN1Q9UKV3 1341 aaKnown RBP11.77□□□□□ -0.53
LPCAT3-213ENST00000620843 ZBTB24O43167 697 aaPredicted RBP11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 SKIP12755 728 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 SH3BP2P78314 561 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 PLA2G2CQ5R387 149 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 NFATC2IPQ8NCF5 419 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 FAM174AQ8TBP5 190 aa11.76□□□□□ -0.53
LPCAT3-213ENST00000620843 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
LPCAT3-213ENST00000620843 ERFEQ4G0M1 354 aa11.75□□□□□ -0.53
LPCAT3-213ENST00000620843 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
LPCAT3-213ENST00000620843 TRIM32Q13049 653 aa11.74□□□□□ -0.53
LPCAT3-213ENST00000620843 CDCA8Q53HL2 280 aa11.74□□□□□ -0.53
LPCAT3-213ENST00000620843 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
LPCAT3-213ENST00000620843 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
LPCAT3-213ENST00000620843 USP17L3A6NCW0 530 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 USP17L4A6NCW7 530 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 USP17L5A8MUK1 530 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 USP17L1Q7RTZ2 530 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 PHTF2Q8N3S3 785 aa11.72□□□□□ -0.53
LPCAT3-213ENST00000620843 MMRN1Q13201 1228 aa11.71□□□□□ -0.53
LPCAT3-213ENST00000620843 DEPDC4Q8N2C3 294 aa11.71□□□□□ -0.53
LPCAT3-213ENST00000620843 SLC10A4Q96EP9 437 aa11.71□□□□□ -0.53
LPCAT3-213ENST00000620843 C1QTNF2Q9BXJ5 285 aa11.71□□□□□ -0.53
LPCAT3-213ENST00000620843 SKOR1P84550 965 aa11.69□□□□□ -0.54
LPCAT3-213ENST00000620843 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
LPCAT3-213ENST00000620843 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
LPCAT3-213ENST00000620843 VRTNQ9H8Y1 702 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms