RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 NOL7Q9UMY1 257 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 ERBINQ96RT1 1412 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 KDM5CP41229 1560 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 CGNQ9P2M7 1197 aaKnown RBP12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 CCDC39Q9UFE4 941 aa12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 ADGBQ8N7X0 1667 aa12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 SHANK2Q9UPX8 1470 aa12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 CCDC94Q9BW85 323 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP3-210ENST00000620204 CFAP65Q6ZU64 1925 aaKnown RBP12.03□□□□□ -0.48
TNFAIP3-210ENST00000620204 SMC5Q8IY18 1101 aa12.03□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
TNFAIP3-210ENST00000620204 FAM135AQ9P2D6 1515 aa12.03□□□□□ -0.48
TNFAIP3-210ENST00000620204 TSPOAP1O95153 1857 aa12.02□□□□□ -0.49
TNFAIP3-210ENST00000620204 PKP1Q13835 747 aa12.02□□□□□ -0.49
TNFAIP3-210ENST00000620204 ELL2O00472 640 aaPredicted RBP12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 EXOSC9Q06265 439 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 ABCC1P33527 1531 aa12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 ARHGEF5Q12774 1597 aa12.01□□□□□ -0.49
TNFAIP3-210ENST00000620204 STK26Q9P289 416 aa12□□□□□ -0.49
TNFAIP3-210ENST00000620204 CHAF1AQ13111 956 aaPredicted RBP12□□□□□ -0.49
TNFAIP3-210ENST00000620204 NOB1Q9ULX3 412 aaKnown RBP12□□□□□ -0.49
TNFAIP3-210ENST00000620204 NUCB2P80303 420 aa12□□□□□ -0.49
TNFAIP3-210ENST00000620204 RUNDC1Q96C34 613 aa12□□□□□ -0.49
TNFAIP3-210ENST00000620204 TMEM57Q8N5G2 664 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 CFAP53Q96M91 514 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 TTC12Q9H892 705 aaPredicted RBP11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 KIF16BQ96L93 1317 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 TRIM27P14373 513 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 TERF1P54274 439 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 DMTNQ08495 405 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
TNFAIP3-210ENST00000620204 CHD1LQ86WJ1 897 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 SNX21Q969T3 373 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 NLRP1Q9C000 1473 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 ATP7AQ04656 1500 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 PDCL2Q8N4E4 241 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 GDPD2Q9HCC8 539 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
TNFAIP3-210ENST00000620204 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 ZBTB22O15209 634 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 ZGPATQ8N5A5 531 aaKnown RBP11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 SSH1Q8WYL5 1049 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 ZSCAN20P17040 1043 aaPredicted RBP11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 MTHFSP49914 203 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 TMEM132EQ6IEE7 984 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 USP25Q9UHP3 1055 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 TRAK1Q9UPV9 953 aa11.97□□□□□ -0.49
TNFAIP3-210ENST00000620204 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
TNFAIP3-210ENST00000620204 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.5
TNFAIP3-210ENST00000620204 TRERF1Q96PN7 1200 aa11.96□□□□□ -0.5
TNFAIP3-210ENST00000620204 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.52e-16■■■■□ 24.9
TNFAIP3-210ENST00000620204 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 SPC24Q8NBT2 197 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 SLC24A1O60721 1099 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 LMBRD1Q9NUN5 540 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 NINLQ9Y2I6 1382 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 A2MP01023 1474 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 POLR1AO95602 1720 aaPredicted RBP11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 ATP2B3Q16720 1220 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 TMEM63CQ9P1W3 806 aa11.95□□□□□ -0.5
TNFAIP3-210ENST00000620204 YEATS2Q9ULM3 1422 aa11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 ST18O60284 1047 aa11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 TSPY26PQ9H489 355 aa11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 ZNF445P59923 1031 aa11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 NOLC1Q14978 699 aaKnown RBP eCLIP11.94□□□□□ -0.5
TNFAIP3-210ENST00000620204 CHMP4AQ9BY43 222 aa11.93□□□□□ -0.5
TNFAIP3-210ENST00000620204 NSFL1CQ9UNZ2 370 aaKnown RBP11.93□□□□□ -0.5
TNFAIP3-210ENST00000620204 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
TNFAIP3-210ENST00000620204 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
TNFAIP3-210ENST00000620204 PRAG1Q86YV5 1406 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 ERICH4A6NGS2 130 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 DRC7Q8IY82 874 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 CDC45O75419 566 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 NGEFQ8N5V2 710 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 ABCA9Q8IUA7 1624 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
TNFAIP3-210ENST00000620204 MCM5P33992 734 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms