RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
SYN3-213ENST00000619146 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
SYN3-213ENST00000619146 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
SYN3-213ENST00000619146 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
SYN3-213ENST00000619146 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
SYN3-213ENST00000619146 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
SYN3-213ENST00000619146 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
SYN3-213ENST00000619146 ITSN1Q15811 1721 aa13.35□□□□□ -0.27
SYN3-213ENST00000619146 TRIM37O94972 964 aa13.33□□□□□ -0.28
SYN3-213ENST00000619146 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
SYN3-213ENST00000619146 POGKQ9P215 609 aa13.33□□□□□ -0.28
SYN3-213ENST00000619146 SBF2Q86WG5 1849 aa13.33□□□□□ -0.28
SYN3-213ENST00000619146 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
SYN3-213ENST00000619146 MINK1Q8N4C8 1332 aaPredicted RBP13.32□□□□□ -0.28
SYN3-213ENST00000619146 KAT6BQ8WYB5 2073 aa13.32□□□□□ -0.28
SYN3-213ENST00000619146 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
SYN3-213ENST00000619146 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
SYN3-213ENST00000619146 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
SYN3-213ENST00000619146 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
SYN3-213ENST00000619146 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
SYN3-213ENST00000619146 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
SYN3-213ENST00000619146 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
SYN3-213ENST00000619146 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
SYN3-213ENST00000619146 TRAK1Q9UPV9 953 aa13.29□□□□□ -0.28
SYN3-213ENST00000619146 PRR36Q9H6K5 1346 aa13.29□□□□□ -0.28
SYN3-213ENST00000619146 APBA3O96018 575 aa13.28□□□□□ -0.28
SYN3-213ENST00000619146 YY1P25490 414 aa13.28□□□□□ -0.28
SYN3-213ENST00000619146 PRDM11Q9NQV5 511 aa13.28□□□□□ -0.28
SYN3-213ENST00000619146 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
SYN3-213ENST00000619146 RGPD5Q99666 1765 aa13.27□□□□□ -0.28
SYN3-213ENST00000619146 ZC3H6P61129 1189 aaKnown RBP13.27□□□□□ -0.29
SYN3-213ENST00000619146 NGDNQ8NEJ9 315 aaKnown RBP13.27□□□□□ -0.29
SYN3-213ENST00000619146 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.29
SYN3-213ENST00000619146 DLC1Q96QB1 1528 aa13.27□□□□□ -0.29
SYN3-213ENST00000619146 CHD4Q14839 1912 aa13.26□□□□□ -0.29
SYN3-213ENST00000619146 KIAA0232Q92628 1395 aa13.26□□□□□ -0.29
SYN3-213ENST00000619146 SIRT1Q96EB6 747 aa13.26□□□□□ -0.29
SYN3-213ENST00000619146 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
SYN3-213ENST00000619146 TULP4Q9NRJ4 1543 aa13.26□□□□□ -0.29
SYN3-213ENST00000619146 AKAP12Q02952 1782 aa13.25□□□□□ -0.29
SYN3-213ENST00000619146 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
SYN3-213ENST00000619146 DISP2A7MBM2 1401 aa13.25□□□□□ -0.29
SYN3-213ENST00000619146 SPATA31A1Q5TZJ5 1347 aa13.25□□□□□ -0.29
SYN3-213ENST00000619146 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
SYN3-213ENST00000619146 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
SYN3-213ENST00000619146 WNK3Q9BYP7 1800 aa13.24□□□□□ -0.29
SYN3-213ENST00000619146 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
SYN3-213ENST00000619146 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
SYN3-213ENST00000619146 NEUROD1Q13562 356 aa13.23□□□□□ -0.29
SYN3-213ENST00000619146 FAM196AQ6ZSG2 479 aa13.23□□□□□ -0.29
SYN3-213ENST00000619146 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
SYN3-213ENST00000619146 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
SYN3-213ENST00000619146 SIN3AQ96ST3 1273 aa13.22□□□□□ -0.29
SYN3-213ENST00000619146 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
SYN3-213ENST00000619146 EVA1CP58658 441 aa13.21□□□□□ -0.29
SYN3-213ENST00000619146 PDE3BQ13370 1112 aa13.21□□□□□ -0.29
SYN3-213ENST00000619146 MYOM1P52179 1685 aa13.21□□□□□ -0.3
SYN3-213ENST00000619146 LMO7Q8WWI1 1683 aa13.21□□□□□ -0.3
SYN3-213ENST00000619146 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
SYN3-213ENST00000619146 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
SYN3-213ENST00000619146 LARP1Q6PKG0 1096 aaKnown RBP13.2□□□□□ -0.3
SYN3-213ENST00000619146 ATP7BP35670 1465 aa13.19□□□□□ -0.3
SYN3-213ENST00000619146 SSH2Q76I76 1423 aa13.19□□□□□ -0.3
SYN3-213ENST00000619146 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
SYN3-213ENST00000619146 TONSLQ96HA7 1378 aa13.19□□□□□ -0.3
SYN3-213ENST00000619146 LRRC37A3O60309 1634 aa13.18□□□□□ -0.3
SYN3-213ENST00000619146 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
SYN3-213ENST00000619146 NBPF14Q5TI25 921 aa13.18□□□□□ -0.3
SYN3-213ENST00000619146 EIF3AQ14152 1382 aaKnown RBP13.18□□□□□ -0.3
SYN3-213ENST00000619146 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
SYN3-213ENST00000619146 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
SYN3-213ENST00000619146 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
SYN3-213ENST00000619146 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
SYN3-213ENST00000619146 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
SYN3-213ENST00000619146 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
SYN3-213ENST00000619146 KCNQ2O43526 872 aa13.15□□□□□ -0.3
SYN3-213ENST00000619146 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
SYN3-213ENST00000619146 UTRNP46939 3433 aa13.14□□□□□ -0.31
SYN3-213ENST00000619146 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
SYN3-213ENST00000619146 PTF1AQ7RTS3 328 aa13.14□□□□□ -0.31
SYN3-213ENST00000619146 TCP11L2Q8N4U5 519 aa13.14□□□□□ -0.31
SYN3-213ENST00000619146 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
SYN3-213ENST00000619146 ACEP12821 1306 aa13.13□□□□□ -0.31
SYN3-213ENST00000619146 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
SYN3-213ENST00000619146 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
SYN3-213ENST00000619146 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
SYN3-213ENST00000619146 COL18A1P39060 1754 aa13.12□□□□□ -0.31
SYN3-213ENST00000619146 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
SYN3-213ENST00000619146 ZBTB7AO95365 584 aa13.12□□□□□ -0.31
SYN3-213ENST00000619146 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
SYN3-213ENST00000619146 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
SYN3-213ENST00000619146 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
SYN3-213ENST00000619146 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
SYN3-213ENST00000619146 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
SYN3-213ENST00000619146 PIK3C2AO00443 1686 aa13.09□□□□□ -0.31
SYN3-213ENST00000619146 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
SYN3-213ENST00000619146 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
SYN3-213ENST00000619146 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
SYN3-213ENST00000619146 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
SYN3-213ENST00000619146 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms