RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 PDZRN3Q9UPQ7 1066 aa19.5■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
CNTNAP3B-214ENST00000618777 POLR3GO15318 223 aaPredicted RBP19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CRACR2AQ9BSW2 395 aa19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 FAM193AP78312 1265 aa19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 PAIP2Q9BPZ3 127 aaKnown RBP19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 ERICH2A1L162 156 aa19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 C9orf78Q9NZ63 289 aaPredicted RBP19.49■□□□□ 0.71
CNTNAP3B-214ENST00000618777 ENOX2Q16206 610 aaKnown RBP19.48■□□□□ 0.71
CNTNAP3B-214ENST00000618777 PTPN14Q15678 1187 aa19.48■□□□□ 0.71
CNTNAP3B-214ENST00000618777 MAGEC2Q9UBF1 373 aaPredicted RBP19.48■□□□□ 0.71
CNTNAP3B-214ENST00000618777 FAM177A1Q8N128 213 aaPredicted RBP19.48■□□□□ 0.71
CNTNAP3B-214ENST00000618777 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 RALYLQ86SE5 291 aaKnown RBP19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 KIF18AQ8NI77 898 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CSB-PGBD3P0DP91 1061 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 NF2P35240 595 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CCDC91Q7Z6B0 441 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 KRT85P78386 507 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 MICALCLQ6ZW33 695 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 DACH1Q9UI36 760 aa19.47■□□□□ 0.71
CNTNAP3B-214ENST00000618777 G3BP1Q13283 466 aaKnown RBP eCLIP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 SEPT7Q16181 437 aaKnown RBP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 BRMS1Q9HCU9 246 aa19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 RBM28Q9NW13 759 aaKnown RBP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 BRPF1P55201 1214 aaPredicted RBP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 BMS1Q14692 1282 aaKnown RBP19.46■□□□□ 0.71
CNTNAP3B-214ENST00000618777 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.7
CNTNAP3B-214ENST00000618777 DHX37Q8IY37 1157 aaKnown RBP19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 TAX1BP1Q86VP1 789 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 JMYQ8N9B5 988 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 SARNPP82979 210 aaKnown RBP19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 STK38Q15208 465 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 RB1CC1Q8TDY2 1594 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 EZRP15311 586 aaKnown RBP19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 XBP1P17861 261 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 ZFYVE27Q5T4F4 411 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 CEP57L1Q8IYX8 460 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 RASSF4Q9H2L5 321 aa19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 CLASRPQ8N2M8 674 aaKnown RBP19.45■□□□□ 0.7
CNTNAP3B-214ENST00000618777 RBM33Q96EV2 1170 aaKnown RBP19.44■□□□□ 0.7
CNTNAP3B-214ENST00000618777 MAP9Q49MG5 647 aa19.44■□□□□ 0.7
CNTNAP3B-214ENST00000618777 AMPHP49418 695 aa19.44■□□□□ 0.7
CNTNAP3B-214ENST00000618777 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
CNTNAP3B-214ENST00000618777 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
CNTNAP3B-214ENST00000618777 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
CNTNAP3B-214ENST00000618777 BRD4O60885 1362 aaPredicted RBP19.43■□□□□ 0.7
CNTNAP3B-214ENST00000618777 HOMEZQ8IX15 550 aa19.43■□□□□ 0.7
CNTNAP3B-214ENST00000618777 NUP62CLQ9H1M0 184 aa19.42■□□□□ 0.7
CNTNAP3B-214ENST00000618777 TCEAL9Q9UHQ7 104 aa19.42■□□□□ 0.7
CNTNAP3B-214ENST00000618777 RIPK4P57078 832 aa19.42■□□□□ 0.7
CNTNAP3B-214ENST00000618777 GCC1Q96CN9 775 aa19.42■□□□□ 0.7
CNTNAP3B-214ENST00000618777 WASHC2AQ641Q2 1341 aa19.42■□□□□ 0.7
CNTNAP3B-214ENST00000618777 MCM3P25205 808 aa19.41■□□□□ 0.7
CNTNAP3B-214ENST00000618777 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.41■□□□□ 0.7
CNTNAP3B-214ENST00000618777 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
CNTNAP3B-214ENST00000618777 TTC31Q49AM3 519 aaPredicted RBP19.41■□□□□ 0.7
CNTNAP3B-214ENST00000618777 HMGB1P09429 215 aaKnown RBP19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 SYCE3A1L190 88 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 IVLP07476 585 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 XRCC6P12956 609 aaKnown RBP eCLIP19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 LMAN1P49257 510 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 GNAI1P63096 354 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 BANK1Q8NDB2 785 aa19.4■□□□□ 0.7
CNTNAP3B-214ENST00000618777 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
CNTNAP3B-214ENST00000618777 ZSCAN12O43309 604 aa19.39■□□□□ 0.69
CNTNAP3B-214ENST00000618777 FKBP5Q13451 457 aaPredicted RBP19.39■□□□□ 0.69
CNTNAP3B-214ENST00000618777 CCDC148Q8NFR7 591 aa19.39■□□□□ 0.69
CNTNAP3B-214ENST00000618777 WASHC2CQ9Y4E1 1318 aa19.39■□□□□ 0.69
CNTNAP3B-214ENST00000618777 ANKRD62A6NC57 917 aa19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 ARHGAP29Q52LW3 1261 aa19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 KIAA1328Q86T90 577 aa19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 JAKMIP3Q5VZ66 844 aa19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 UPF3BQ9BZI7 483 aaKnown RBP19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 SMTNL1A8MU46 457 aa19.38■□□□□ 0.69
CNTNAP3B-214ENST00000618777 TXLNAP40222 546 aa19.37■□□□□ 0.69
CNTNAP3B-214ENST00000618777 SFPQP23246 707 aaKnown RBP eCLIP19.37■□□□□ 0.69
CNTNAP3B-214ENST00000618777 MAP3K11Q16584 847 aa19.37■□□□□ 0.69
CNTNAP3B-214ENST00000618777 DIAPH1O60610 1272 aaKnown RBP19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 GBP2P32456 591 aaPredicted RBP19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 CPSF2Q9P2I0 782 aaKnown RBP19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 ME1P48163 572 aa19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 IGSF3O75054 1194 aa19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 HIP1O00291 1037 aa19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
CNTNAP3B-214ENST00000618777 EPB41L2O43491 1005 aaKnown RBP19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 CEBPZQ03701 1054 aaKnown RBP19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 CCDC43Q96MW1 224 aaKnown RBP19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 RNF187Q5TA31 235 aaPredicted RBP19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 DDX58O95786 925 aaKnown RBP19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 FEZ1Q99689 392 aa19.35■□□□□ 0.69
CNTNAP3B-214ENST00000618777 GGT6Q6P531 493 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms