RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 PTPRUQ92729 1446 aa10.53□□□□□ -0.72
RPRD1B-208ENST00000618318 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.73
RPRD1B-208ENST00000618318 ATP7BP35670 1465 aa10.52□□□□□ -0.73
RPRD1B-208ENST00000618318 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
RPRD1B-208ENST00000618318 MYOM1P52179 1685 aa10.51□□□□□ -0.73
RPRD1B-208ENST00000618318 ZBED9Q6R2W3 1325 aa10.51□□□□□ -0.73
RPRD1B-208ENST00000618318 PPIP5K1Q6PFW1 1433 aa10.5□□□□□ -0.73
RPRD1B-208ENST00000618318 PHLPP1O60346 1717 aa10.5□□□□□ -0.73
RPRD1B-208ENST00000618318 NWD1Q149M9 1564 aa10.5□□□□□ -0.73
RPRD1B-208ENST00000618318 FYB1O15117 783 aa10.49□□□□□ -0.73
RPRD1B-208ENST00000618318 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
RPRD1B-208ENST00000618318 NUDCQ9Y266 331 aa10.49□□□□□ -0.73
RPRD1B-208ENST00000618318 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
RPRD1B-208ENST00000618318 PROSER2Q86WR7 435 aaPredicted RBP10.48□□□□□ -0.73
RPRD1B-208ENST00000618318 NGEFQ8N5V2 710 aa10.48□□□□□ -0.73
RPRD1B-208ENST00000618318 NGDNQ8NEJ9 315 aaKnown RBP10.48□□□□□ -0.73
RPRD1B-208ENST00000618318 EDC4Q6P2E9 1401 aaKnown RBP10.48□□□□□ -0.73
RPRD1B-208ENST00000618318 ADGRB2O60241 1585 aa10.48□□□□□ -0.73
RPRD1B-208ENST00000618318 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 MTHFSP49914 203 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 PDE3BQ13370 1112 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.734e-7■■■□□ 15.8
RPRD1B-208ENST00000618318 COG3Q96JB2 828 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 GGNBP2Q9H3C7 697 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 TMEM94Q12767 1356 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 CPSF1Q10570 1443 aaKnown RBP10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
RPRD1B-208ENST00000618318 TNNT2P45379 298 aaPredicted RBP10.46□□□□□ -0.73
RPRD1B-208ENST00000618318 ACEP12821 1306 aa10.46□□□□□ -0.73
RPRD1B-208ENST00000618318 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.73
RPRD1B-208ENST00000618318 NKTRP30414 1462 aaKnown RBP10.46□□□□□ -0.74
RPRD1B-208ENST00000618318 CD163L1Q9NR16 1453 aa10.45□□□□□ -0.74
RPRD1B-208ENST00000618318 PRR36Q9H6K5 1346 aa10.45□□□□□ -0.74
RPRD1B-208ENST00000618318 MYCNP04198 464 aaPredicted RBP10.45□□□□□ -0.74
RPRD1B-208ENST00000618318 ADAMTS8Q9UP79 889 aa10.45□□□□□ -0.74
RPRD1B-208ENST00000618318 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 LRP6O75581 1613 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 NCOA3Q9Y6Q9 1424 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 TTC21BQ7Z4L5 1316 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 NUTM2FA1L443 756 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 C19orf44Q9H6X5 657 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
RPRD1B-208ENST00000618318 NEFLP07196 543 aa10.43□□□□□ -0.74
RPRD1B-208ENST00000618318 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
RPRD1B-208ENST00000618318 GTF3C3Q9Y5Q9 886 aa10.43□□□□□ -0.74
RPRD1B-208ENST00000618318 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
RPRD1B-208ENST00000618318 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
RPRD1B-208ENST00000618318 CHD2O14647 1828 aaKnown RBP10.42□□□□□ -0.74
RPRD1B-208ENST00000618318 JCADQ9P266 1359 aa10.42□□□□□ -0.74
RPRD1B-208ENST00000618318 NEFMP07197 916 aa10.42□□□□□ -0.74
RPRD1B-208ENST00000618318 PMFBP1Q8TBY8 1022 aa10.42□□□□□ -0.74
RPRD1B-208ENST00000618318 RBM42Q9BTD8 480 aaKnown RBP10.42□□□□□ -0.74
RPRD1B-208ENST00000618318 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 AATKQ6ZMQ8 1374 aa10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 DIAPH1O60610 1272 aaKnown RBP10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 ATF3P18847 181 aa10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 NME9Q86XW9 330 aa10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 USP6P35125 1406 aa10.41□□□□□ -0.74
RPRD1B-208ENST00000618318 PSME1Q06323 249 aa10.4□□□□□ -0.74
RPRD1B-208ENST00000618318 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
RPRD1B-208ENST00000618318 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.746e-8■■■■□ 19.8
RPRD1B-208ENST00000618318 RUNDC1Q96C34 613 aa10.4□□□□□ -0.74
RPRD1B-208ENST00000618318 BLMP54132 1417 aaPredicted RBP10.4□□□□□ -0.75
RPRD1B-208ENST00000618318 AHDC1Q5TGY3 1603 aaPredicted RBP10.4□□□□□ -0.75
RPRD1B-208ENST00000618318 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
RPRD1B-208ENST00000618318 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.75
RPRD1B-208ENST00000618318 POLA2Q14181 598 aa10.39□□□□□ -0.75
RPRD1B-208ENST00000618318 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
RPRD1B-208ENST00000618318 MSH6P52701 1360 aa10.39□□□□□ -0.75
RPRD1B-208ENST00000618318 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
RPRD1B-208ENST00000618318 POLKQ9UBT6 870 aa10.38□□□□□ -0.75
RPRD1B-208ENST00000618318 CDK12Q9NYV4 1490 aaPredicted RBP10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 U2SURPO15042 1029 aaKnown RBP10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 NLRP6P59044 892 aa10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 ITSN1Q15811 1721 aa10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 RBM33Q96EV2 1170 aaKnown RBP10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 USP31Q70CQ4 1352 aa10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 PNPLA6Q8IY17 1366 aa10.37□□□□□ -0.75
RPRD1B-208ENST00000618318 SMG6Q86US8 1419 aaKnown RBP10.36□□□□□ -0.75
RPRD1B-208ENST00000618318 APAF1O14727 1248 aa10.36□□□□□ -0.75
RPRD1B-208ENST00000618318 PAK3O75914 559 aaPredicted RBP10.36□□□□□ -0.75
RPRD1B-208ENST00000618318 FCHSD2O94868 740 aa10.36□□□□□ -0.75
RPRD1B-208ENST00000618318 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
RPRD1B-208ENST00000618318 SPATA31A6Q5VVP1 1343 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 MAPK8IP3Q9UPT6 1336 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 DCCP43146 1447 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 SSH2Q76I76 1423 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 CCDC146Q8IYE0 955 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 SLAIN2Q9P270 581 aa10.35□□□□□ -0.75
RPRD1B-208ENST00000618318 TOPAZ1Q8N9V7 1692 aa10.34□□□□□ -0.75
RPRD1B-208ENST00000618318 AKAP12Q02952 1782 aa10.34□□□□□ -0.75
RPRD1B-208ENST00000618318 MON2Q7Z3U7 1717 aa10.34□□□□□ -0.75
RPRD1B-208ENST00000618318 FMN2Q9NZ56 1722 aa10.34□□□□□ -0.75
RPRD1B-208ENST00000618318 ANKRD26Q9UPS8 1709 aa10.34□□□□□ -0.75
RPRD1B-208ENST00000618318 ERICH6BQ5W0A0 696 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms