RNA–Protein interactions for RNA: ENST00000618119.4

ALK-205, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5 BASIC

Gene ALK, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-205ENST00000618119 AP1ARQ63HQ0 302 aa14.37□□□□□ -0.11
ALK-205ENST00000618119 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
ALK-205ENST00000618119 UVSSAQ2YD98 709 aa14.37□□□□□ -0.11
ALK-205ENST00000618119 PPM1EQ8WY54 764 aa14.37□□□□□ -0.11
ALK-205ENST00000618119 LRRFIP2Q9Y608 721 aaKnown RBP14.37□□□□□ -0.11
ALK-205ENST00000618119 TMX1Q9H3N1 280 aa14.37□□□□□ -0.11
ALK-205ENST00000618119 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
ALK-205ENST00000618119 CADPSQ9ULU8 1353 aa14.36□□□□□ -0.11
ALK-205ENST00000618119 BICD2Q8TD16 824 aa14.36□□□□□ -0.11
ALK-205ENST00000618119 TNPO1Q92973 898 aaKnown RBP14.36□□□□□ -0.11
ALK-205ENST00000618119 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
ALK-205ENST00000618119 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
ALK-205ENST00000618119 EZRP15311 586 aaKnown RBP14.35□□□□□ -0.11
ALK-205ENST00000618119 NGEFQ8N5V2 710 aa14.35□□□□□ -0.11
ALK-205ENST00000618119 IPO7O95373 1038 aaKnown RBP14.35□□□□□ -0.11
ALK-205ENST00000618119 MCM2P49736 904 aa14.35□□□□□ -0.11
ALK-205ENST00000618119 U2AF2P26368 475 aaKnown RBP eCLIP14.34□□□□□ -0.11
ALK-205ENST00000618119 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
ALK-205ENST00000618119 KIF21BO75037 1637 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 USP47Q96K76 1375 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 LRRCC1Q9C099 1032 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
ALK-205ENST00000618119 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
ALK-205ENST00000618119 SMC2O95347 1197 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 ANKRD45Q5TZF3 282 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 LUZP1Q86V48 1076 aa14.34□□□□□ -0.11
ALK-205ENST00000618119 KRBA2Q6ZNG9 492 aa14.33□□□□□ -0.12
ALK-205ENST00000618119 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
ALK-205ENST00000618119 PDS5BQ9NTI5 1447 aa14.33□□□□□ -0.12
ALK-205ENST00000618119 NEMFO60524 1076 aa14.33□□□□□ -0.12
ALK-205ENST00000618119 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
ALK-205ENST00000618119 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
ALK-205ENST00000618119 PANK3Q9H999 370 aa14.32□□□□□ -0.12
ALK-205ENST00000618119 CHMP3Q9Y3E7 222 aa14.32□□□□□ -0.12
ALK-205ENST00000618119 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
ALK-205ENST00000618119 CCDC7Q96M83 1385 aa14.31□□□□□ -0.12
ALK-205ENST00000618119 ZNF500O60304 480 aaPredicted RBP14.31□□□□□ -0.12
ALK-205ENST00000618119 SAFB2Q14151 953 aaKnown RBP eCLIP14.31□□□□□ -0.12
ALK-205ENST00000618119 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
ALK-205ENST00000618119 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
ALK-205ENST00000618119 EFCAB2Q5VUJ9 269 aa14.31□□□□□ -0.12
ALK-205ENST00000618119 DDX19BQ9UMR2 479 aa14.31□□□□□ -0.12
ALK-205ENST00000618119 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
ALK-205ENST00000618119 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.3□□□□□ -0.12
ALK-205ENST00000618119 APBB1O00213 710 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 USP25Q9UHP3 1055 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 UACAQ9BZF9 1416 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 ENOX2Q16206 610 aaKnown RBP14.3□□□□□ -0.12
ALK-205ENST00000618119 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 CDC45O75419 566 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 HNRNPMP52272 730 aaKnown RBP eCLIP14.3□□□□□ -0.12
ALK-205ENST00000618119 SMC3Q9UQE7 1217 aa14.3□□□□□ -0.12
ALK-205ENST00000618119 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.3□□□□□ -0.12
ALK-205ENST00000618119 CAPN2P17655 700 aa14.29□□□□□ -0.12
ALK-205ENST00000618119 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
ALK-205ENST00000618119 CCDC73Q6ZRK6 1079 aa14.29□□□□□ -0.12
ALK-205ENST00000618119 KIF1CO43896 1103 aaKnown RBP14.29□□□□□ -0.12
ALK-205ENST00000618119 CASQ1P31415 396 aa14.29□□□□□ -0.12
ALK-205ENST00000618119 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
ALK-205ENST00000618119 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
ALK-205ENST00000618119 H3BQV1 296 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 NEBLO76041 1014 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 LRSAM1Q6UWE0 723 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 SMARCC1Q92922 1105 aaPredicted RBP14.28□□□□□ -0.12
ALK-205ENST00000618119 CRACR2AQ9BSW2 395 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 POTEB2H3BUK9 544 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 ADCY5O95622 1261 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 TMX4Q9H1E5 349 aaPredicted RBP14.28□□□□□ -0.12
ALK-205ENST00000618119 RBBP5Q15291 538 aaKnown RBP14.28□□□□□ -0.12
ALK-205ENST00000618119 ANKRD18AQ8IVF6 992 aa14.28□□□□□ -0.12
ALK-205ENST00000618119 BRD4O60885 1362 aaPredicted RBP14.28□□□□□ -0.12
ALK-205ENST00000618119 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 ICE2Q659A1 982 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 KIF7Q2M1P5 1343 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 FGD6Q6ZV73 1430 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 PDE3AQ14432 1141 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.12
ALK-205ENST00000618119 IGF1RP08069 1367 aa14.27□□□□□ -0.13
ALK-205ENST00000618119 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.13
ALK-205ENST00000618119 CCDC172P0C7W6 258 aa14.27□□□□□ -0.13
ALK-205ENST00000618119 AEBP2Q6ZN18 517 aaPredicted RBP14.27□□□□□ -0.13
ALK-205ENST00000618119 RSRC1Q96IZ7 334 aaKnown RBP14.27□□□□□ -0.13
ALK-205ENST00000618119 CEP83Q9Y592 693 aa14.27□□□□□ -0.13
ALK-205ENST00000618119 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
ALK-205ENST00000618119 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 ERC1Q8IUD2 1116 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 CEP120Q8N960 986 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 CCDC144AA2RUR9 1427 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
ALK-205ENST00000618119 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 CHMP4CQ96CF2 233 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 NEXNQ0ZGT2 675 aa14.26□□□□□ -0.13
ALK-205ENST00000618119 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
ALK-205ENST00000618119 NAA25Q14CX7 972 aa14.25□□□□□ -0.13
ALK-205ENST00000618119 GGT6Q6P531 493 aa14.25□□□□□ -0.13
ALK-205ENST00000618119 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
ALK-205ENST00000618119 NUP133Q8WUM0 1156 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms