RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	IDI1	Q13907	227 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	PANK3	Q9H999	370 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	CLTCL1	P53675	1640 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	KLHL40	Q2TBA0	621 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	TESK2	Q96S53	571 aa		13.4	□□□□□ -0.26
CPEB1-215	ENST00000617958	EFCAB6	Q5THR3	1501 aa		13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	PPP2R1A	P30153	589 aa		13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	RBM25	P49756	843 aa	Known RBP	13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	PDZRN3	Q9UPQ7	1066 aa		13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	RNF17	Q9BXT8	1623 aa	Known RBP	13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	ARHGEF40	Q8TER5	1519 aa		13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	RWDD1	Q9H446	243 aa	Predicted RBP	13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	DISP3	Q9P2K9	1392 aa		13.39	□□□□□ -0.27
CPEB1-215	ENST00000617958	TET3	O43151	1660 aa		13.38	□□□□□ -0.27
CPEB1-215	ENST00000617958	LETM1	O95202	739 aa	Predicted RBP	13.38	□□□□□ -0.27
CPEB1-215	ENST00000617958	GOLGA6L22	H0YM25	854 aa		13.38	□□□□□ -0.27
CPEB1-215	ENST00000617958	TAF3	Q5VWG9	929 aa		13.37	□□□□□ -0.27
CPEB1-215	ENST00000617958	ZKSCAN5	Q9Y2L8	839 aa		13.37	□□□□□ -0.27
CPEB1-215	ENST00000617958	SPRYD3	Q8NCJ5	442 aa		13.37	□□□□□ -0.27
CPEB1-215	ENST00000617958	ADGRF5	Q8IZF2	1346 aa		13.37	□□□□□ -0.27
CPEB1-215	ENST00000617958	SYNM	O15061	1565 aa		13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	TMF1	P82094	1093 aa		13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	PTPRT	O14522	1441 aa		13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	CLTC	Q00610	1675 aa	Known RBP	13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	SPHKAP	Q2M3C7	1700 aa		13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.36	□□□□□ -0.27
CPEB1-215	ENST00000617958	HSP90AB1	P08238	724 aa	Known RBP	13.35	□□□□□ -0.27
CPEB1-215	ENST00000617958	ESF1	Q9H501	851 aa	Known RBP	13.35	□□□□□ -0.27
CPEB1-215	ENST00000617958	COG6	Q9Y2V7	657 aa		13.35	□□□□□ -0.27
CPEB1-215	ENST00000617958	CAMSAP1	Q5T5Y3	1602 aa		13.35	□□□□□ -0.27
CPEB1-215	ENST00000617958	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.35	□□□□□ -0.27
CPEB1-215	ENST00000617958	ASXL1	Q8IXJ9	1541 aa		13.34	□□□□□ -0.27
CPEB1-215	ENST00000617958	CANX	P27824	592 aa	Known RBP	13.34	□□□□□ -0.27
CPEB1-215	ENST00000617958	GTF2E1	P29083	439 aa	Predicted RBP	13.34	□□□□□ -0.27
CPEB1-215	ENST00000617958	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.34	□□□□□ -0.27
CPEB1-215	ENST00000617958	PPP4R3B	Q5MIZ7	849 aa		13.33	□□□□□ -0.27
CPEB1-215	ENST00000617958	BBX	Q8WY36	941 aa	Predicted RBP	13.33	□□□□□ -0.27
CPEB1-215	ENST00000617958	PCDHB15	Q9Y5E8	787 aa		13.33	□□□□□ -0.27
CPEB1-215	ENST00000617958	TRPM2	O94759	1503 aa		13.33	□□□□□ -0.27
CPEB1-215	ENST00000617958	CFAP70	Q5T0N1	1121 aa		13.33	□□□□□ -0.28
CPEB1-215	ENST00000617958	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	PANK1	Q8TE04	598 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	STAC3	Q96MF2	364 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	MROH2A	A6NES4	1674 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	TMEM132E	Q6IEE7	984 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	MYRIP	Q8NFW9	859 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	CCDC39	Q9UFE4	941 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	MFAP1	P55081	439 aa	Known RBP	13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	PRIMPOL	Q96LW4	560 aa		13.32	□□□□□ -0.28
CPEB1-215	ENST00000617958	LMTK2	Q8IWU2	1503 aa		13.31	□□□□□ -0.28
CPEB1-215	ENST00000617958	KNSTRN	Q9Y448	316 aa		13.31	□□□□□ -0.28
CPEB1-215	ENST00000617958	PDIA4	P13667	645 aa	Known RBP	13.3	□□□□□ -0.28
CPEB1-215	ENST00000617958	XPC	Q01831	940 aa	Predicted RBP	13.3	□□□□□ -0.28
CPEB1-215	ENST00000617958	NOS1	P29475	1434 aa		13.3	□□□□□ -0.28
CPEB1-215	ENST00000617958	HMGN5	P82970	282 aa	Known RBP	13.3	□□□□□ -0.28
CPEB1-215	ENST00000617958	STAG3	Q9UJ98	1225 aa		13.3	□□□□□ -0.28
CPEB1-215	ENST00000617958	APAF1	O14727	1248 aa		13.29	□□□□□ -0.28
CPEB1-215	ENST00000617958	DDX49	Q9Y6V7	483 aa	Known RBP	13.29	□□□□□ -0.28
CPEB1-215	ENST00000617958	AGL	P35573	1532 aa		13.28	□□□□□ -0.28
CPEB1-215	ENST00000617958	RARS	P54136	660 aa	Known RBP	13.28	□□□□□ -0.28
CPEB1-215	ENST00000617958	HDAC1	Q13547	482 aa	Predicted RBP	13.28	□□□□□ -0.28
CPEB1-215	ENST00000617958	PRDM10	Q9NQV6	1147 aa		13.28	□□□□□ -0.28
CPEB1-215	ENST00000617958	IPO4	Q8TEX9	1081 aa	Known RBP	13.28	□□□□□ -0.28
CPEB1-215	ENST00000617958	NCBP3	Q53F19	620 aa	Known RBP	13.27	□□□□□ -0.29
CPEB1-215	ENST00000617958	MYO5B	Q9ULV0	1848 aa		13.27	□□□□□ -0.29
CPEB1-215	ENST00000617958	ERVK-7	P63135	1459 aa		13.27	□□□□□ -0.29
CPEB1-215	ENST00000617958		K7ELQ4	463 aa	Predicted RBP	13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	BAG4	O95429	457 aa	Known RBP	13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	ZSCAN23	Q3MJ62	389 aa		13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	CDCA8	Q53HL2	280 aa		13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	KIF16B	Q96L93	1317 aa		13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	PREX1	Q8TCU6	1659 aa		13.26	□□□□□ -0.29
CPEB1-215	ENST00000617958	RERE	Q9P2R6	1566 aa		13.25	□□□□□ -0.29
CPEB1-215	ENST00000617958	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CPEB1-215	ENST00000617958	IQGAP1	P46940	1657 aa		13.25	□□□□□ -0.29
CPEB1-215	ENST00000617958	MVP	Q14764	893 aa	Known RBP	13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	WWC1	Q8IX03	1113 aa		13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	RBSN	Q9H1K0	784 aa		13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	TMEM51	Q9NW97	253 aa		13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	KIAA2012	Q0VF49	1180 aa		13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	STK26	Q9P289	416 aa		13.24	□□□□□ -0.29
CPEB1-215	ENST00000617958	RLBP1	P12271	317 aa		13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	NUCB2	P80303	420 aa		13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	PHF23	Q9BUL5	403 aa	Predicted RBP	13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	MYOM1	P52179	1685 aa		13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	TRAK1	Q9UPV9	953 aa		13.23	□□□□□ -0.29
CPEB1-215	ENST00000617958	TAF7L	Q5H9L4	462 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	CCDC146	Q8IYE0	955 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	KIF2C	Q99661	725 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	SSFA2	P28290	1259 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	WDR63	Q8IWG1	891 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	ZNF710	Q8N1W2	664 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	DMRT2	Q9Y5R5	561 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	IQSEC2	Q5JU85	1478 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	POLR3A	O14802	1390 aa	Predicted RBP	13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	KIF1B	O60333	1816 aa		13.22	□□□□□ -0.29
CPEB1-215	ENST00000617958	CYP2E1	P05181	493 aa	Predicted RBP	13.21	□□□□□ -0.29

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