RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
COL4A2-210ENST00000617564 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
COL4A2-210ENST00000617564 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
COL4A2-210ENST00000617564 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
COL4A2-210ENST00000617564 KCNQ2O43526 872 aa17.78■□□□□ 0.44
COL4A2-210ENST00000617564 EIF3AQ14152 1382 aaKnown RBP17.78■□□□□ 0.44
COL4A2-210ENST00000617564 NBPF8Q3BBV2 869 aa17.77■□□□□ 0.44
COL4A2-210ENST00000617564 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
COL4A2-210ENST00000617564 ADGRB1O14514 1584 aa17.77■□□□□ 0.44
COL4A2-210ENST00000617564 PARD3Q8TEW0 1356 aa17.77■□□□□ 0.43
COL4A2-210ENST00000617564 CABLES1Q8TDN4 633 aa17.76■□□□□ 0.43
COL4A2-210ENST00000617564 SAFB2Q14151 953 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL4A2-210ENST00000617564 POGKQ9P215 609 aa17.75■□□□□ 0.43
COL4A2-210ENST00000617564 TRPM3Q9HCF6 1732 aaPredicted RBP17.75■□□□□ 0.43
COL4A2-210ENST00000617564 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
COL4A2-210ENST00000617564 TRIM37O94972 964 aa17.74■□□□□ 0.43
COL4A2-210ENST00000617564 APBA3O96018 575 aa17.74■□□□□ 0.43
COL4A2-210ENST00000617564 LMOD2Q6P5Q4 547 aa17.74■□□□□ 0.43
COL4A2-210ENST00000617564 TULP4Q9NRJ4 1543 aa17.73■□□□□ 0.43
COL4A2-210ENST00000617564 NRAPQ86VF7 1730 aa17.73■□□□□ 0.43
COL4A2-210ENST00000617564 ALS2Q96Q42 1657 aa17.72■□□□□ 0.43
COL4A2-210ENST00000617564 GPRASP1Q5JY77 1395 aa17.72■□□□□ 0.43
COL4A2-210ENST00000617564 PMFBP1Q8TBY8 1022 aa17.72■□□□□ 0.43
COL4A2-210ENST00000617564 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
COL4A2-210ENST00000617564 RREB1Q92766 1687 aa17.71■□□□□ 0.43
COL4A2-210ENST00000617564 FAM83GA6ND36 823 aa17.71■□□□□ 0.43
COL4A2-210ENST00000617564 COL14A1Q05707 1796 aaKnown RBP17.71■□□□□ 0.43
COL4A2-210ENST00000617564 NUP188Q5SRE5 1749 aa17.7■□□□□ 0.42
COL4A2-210ENST00000617564 RAB3GAP2Q9H2M9 1393 aa17.69■□□□□ 0.42
COL4A2-210ENST00000617564 FAM196AQ6ZSG2 479 aa17.69■□□□□ 0.42
COL4A2-210ENST00000617564 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
COL4A2-210ENST00000617564 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
COL4A2-210ENST00000617564 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
COL4A2-210ENST00000617564 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
COL4A2-210ENST00000617564 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
COL4A2-210ENST00000617564 WASLO00401 505 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-210ENST00000617564 GIGYF1O75420 1035 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-210ENST00000617564 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-210ENST00000617564 THSD7AQ9UPZ6 1657 aa17.66■□□□□ 0.42
COL4A2-210ENST00000617564 CHD4Q14839 1912 aa17.66■□□□□ 0.42
COL4A2-210ENST00000617564 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
COL4A2-210ENST00000617564 SPATA31A5Q5VU36 1347 aa17.65■□□□□ 0.42
COL4A2-210ENST00000617564 SPATA31A7Q8IWB4 1347 aa17.65■□□□□ 0.42
COL4A2-210ENST00000617564 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
COL4A2-210ENST00000617564 ATP7BP35670 1465 aa17.63■□□□□ 0.41
COL4A2-210ENST00000617564 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
COL4A2-210ENST00000617564 NGDNQ8NEJ9 315 aaKnown RBP17.63■□□□□ 0.41
COL4A2-210ENST00000617564 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
COL4A2-210ENST00000617564 DCAF11Q8TEB1 546 aa17.62■□□□□ 0.41
COL4A2-210ENST00000617564 PRDM11Q9NQV5 511 aa17.61■□□□□ 0.41
COL4A2-210ENST00000617564 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
COL4A2-210ENST00000617564 PAK3O75914 559 aaPredicted RBP17.59■□□□□ 0.41
COL4A2-210ENST00000617564 PHRF1Q9P1Y6 1649 aaKnown RBP17.58■□□□□ 0.41
COL4A2-210ENST00000617564 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
COL4A2-210ENST00000617564 MYOM1P52179 1685 aa17.57■□□□□ 0.4
COL4A2-210ENST00000617564 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
COL4A2-210ENST00000617564 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
COL4A2-210ENST00000617564 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
COL4A2-210ENST00000617564 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
COL4A2-210ENST00000617564 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
COL4A2-210ENST00000617564 ZBTB7AO95365 584 aa17.54■□□□□ 0.4
COL4A2-210ENST00000617564 FHDC1Q9C0D6 1143 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-210ENST00000617564 CASZ1Q86V15 1759 aa17.53■□□□□ 0.4
COL4A2-210ENST00000617564 KIAA1210Q9ULL0 1709 aa17.53■□□□□ 0.4
COL4A2-210ENST00000617564 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
COL4A2-210ENST00000617564 PTGER2P43116 358 aa17.52■□□□□ 0.4
COL4A2-210ENST00000617564 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
COL4A2-210ENST00000617564 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
COL4A2-210ENST00000617564 CCDC61Q9Y6R9 512 aa17.51■□□□□ 0.39
COL4A2-210ENST00000617564 ACEP12821 1306 aa17.5■□□□□ 0.39
COL4A2-210ENST00000617564 PLEKHG3A1L390 1219 aa17.5■□□□□ 0.39
COL4A2-210ENST00000617564 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
COL4A2-210ENST00000617564 PDGFDQ9GZP0 370 aaPredicted RBP17.5■□□□□ 0.39
COL4A2-210ENST00000617564 STRN4Q9NRL3 753 aa17.5■□□□□ 0.39
COL4A2-210ENST00000617564 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
COL4A2-210ENST00000617564 CPDO75976 1380 aa17.5■□□□□ 0.39
COL4A2-210ENST00000617564 BARGINQ6ZT62 677 aa17.49■□□□□ 0.39
COL4A2-210ENST00000617564 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
COL4A2-210ENST00000617564 LMO7Q8WWI1 1683 aa17.48■□□□□ 0.39
COL4A2-210ENST00000617564 USP19O94966 1318 aa17.48■□□□□ 0.39
COL4A2-210ENST00000617564 ZC3H6P61129 1189 aaKnown RBP17.48■□□□□ 0.39
COL4A2-210ENST00000617564 BRD4O60885 1362 aaPredicted RBP17.47■□□□□ 0.39
COL4A2-210ENST00000617564 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.39
COL4A2-210ENST00000617564 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
COL4A2-210ENST00000617564 EVA1CP58658 441 aa17.45■□□□□ 0.38
COL4A2-210ENST00000617564 GPR162Q16538 588 aa17.45■□□□□ 0.38
COL4A2-210ENST00000617564 ABTB2Q8N961 1025 aa17.45■□□□□ 0.38
COL4A2-210ENST00000617564 THRAP3Q9Y2W1 955 aaKnown RBP17.45■□□□□ 0.38
COL4A2-210ENST00000617564 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
COL4A2-210ENST00000617564 PLSCR1O15162 318 aa17.43■□□□□ 0.38
COL4A2-210ENST00000617564 NLRP13Q86W25 1043 aa17.43■□□□□ 0.38
COL4A2-210ENST00000617564 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
COL4A2-210ENST00000617564 PPIP5K1Q6PFW1 1433 aa17.43■□□□□ 0.38
COL4A2-210ENST00000617564 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
COL4A2-210ENST00000617564 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
COL4A2-210ENST00000617564 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
COL4A2-210ENST00000617564 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
COL4A2-210ENST00000617564 PARP4Q9UKK3 1724 aaKnown RBP17.41■□□□□ 0.38
COL4A2-210ENST00000617564 C11orf95C9JLR9 678 aaPredicted RBP17.41■□□□□ 0.38
COL4A2-210ENST00000617564 CENPJQ9HC77 1338 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms