RNA–Protein interactions for RNA: ENST00000616657.1

CNTNAP3P1-201, Transcript of contactin associated protein-like 3 pseudogene 1, humanhuman

BASIC

Gene CNTNAP3P1, Length 906 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3P1-201ENST00000616657 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 KIF1BO60333 1816 aa9.79□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 ACIN1Q9UKV3 1341 aaKnown RBP9.79□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 ASXL1Q8IXJ9 1541 aa9.77□□□□□ -0.84
CNTNAP3P1-201ENST00000616657 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 NKX1-1Q15270 411 aaPredicted RBP9.77□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 FAM163AQ96GL9 167 aaPredicted RBP9.77□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 SETBP1Q9Y6X0 1596 aa9.76□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 CLTCL1P53675 1640 aa9.76□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 PLCG2P16885 1265 aa9.76□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 IRX5P78411 483 aaPredicted RBP9.76□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 SLAIN2Q9P270 581 aa9.76□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 GTPBP6O43824 516 aaPredicted RBP9.74□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 ATF3P18847 181 aa9.74□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 TRIM52Q96A61 297 aa9.74□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 DCCP43146 1447 aa9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 PTPRUQ92729 1446 aa9.72□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
CNTNAP3P1-201ENST00000616657 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 OCEL1Q9H607 264 aa9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 NUP155O75694 1391 aa9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 EP400Q96L91 3159 aa9.71□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 PPLO60437 1756 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 SOX12O15370 315 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 ZNF772Q68DY9 489 aaPredicted RBP9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 TIMELESSQ9UNS1 1208 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 MST1RQ04912 1400 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 ADGRL3Q9HAR2 1447 aa9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 MARF1Q9Y4F3 1742 aaKnown RBP9.7□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 SRCAPQ6ZRS2 3230 aa9.69□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 CDK12Q9NYV4 1490 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 GOLGA2Q08379 1002 aa9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 BRINP3Q76B58 766 aa9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 LAMC1P11047 1609 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 RGS12O14924 1447 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 AFF2P51816 1311 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 CENPBP07199 599 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 NLRP6P59044 892 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 METP08581 1390 aa9.65□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 MKRN3Q13064 507 aaKnown RBP9.65□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
CNTNAP3P1-201ENST00000616657 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 PNPLA6Q8IY17 1366 aa9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 COL22A1Q8NFW1 1626 aaPredicted RBP9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 RXRBP28702 533 aa9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 SLAIN1Q8ND83 568 aa9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 IFT172Q9UG01 1749 aa9.64□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 KNDC1Q76NI1 1749 aa9.63□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 CDAN1Q8IWY9 1227 aa9.63□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 DDX17Q92841 729 aaKnown RBP9.63□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 CDC42BPGQ6DT37 1551 aa9.63□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 EFCAB3Q8N7B9 438 aa9.62□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 MPHOSPH9Q99550 1183 aa9.62□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 TONSLQ96HA7 1378 aa9.62□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 SIN3AQ96ST3 1273 aa9.61□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.61□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 RGPD8O14715 1765 aaPredicted RBP9.6□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 ABCA3Q99758 1704 aa9.6□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 KIF1AQ12756 1690 aa9.6□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 BRWD3Q6RI45 1802 aa9.59□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 PLCH1Q4KWH8 1693 aa9.59□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 LRRC59Q96AG4 307 aaKnown RBP9.59□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
CNTNAP3P1-201ENST00000616657 NEUROD1Q13562 356 aa9.58□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 FBXO22Q8NEZ5 403 aa9.58□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 ATAD2Q6PL18 1390 aa9.58□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 USP32Q8NFA0 1604 aa9.57□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 DIEXFQ68CQ4 756 aaKnown RBP9.57□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 PRAG1Q86YV5 1406 aa9.56□□□□□ -0.88
CNTNAP3P1-201ENST00000616657 PXDNQ92626 1479 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms