RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 FAM174AQ8TBP5 190 aa7.95□□□□□ -1.14
RFC3-203ENST00000616236 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
RFC3-203ENST00000616236 BCL2L13Q9BXK5 485 aa7.95□□□□□ -1.14
RFC3-203ENST00000616236 MKRN1Q9UHC7 482 aaKnown RBP7.95□□□□□ -1.14
RFC3-203ENST00000616236 CFHP08603 1231 aa7.94□□□□□ -1.14
RFC3-203ENST00000616236 SERPINB4P48594 390 aa7.94□□□□□ -1.14
RFC3-203ENST00000616236 MARSP56192 900 aaKnown RBP7.94□□□□□ -1.14
RFC3-203ENST00000616236 FAM69CQ0P6D2 419 aa7.94□□□□□ -1.14
RFC3-203ENST00000616236 FAM200AQ8TCP9 573 aa7.94□□□□□ -1.14
RFC3-203ENST00000616236 CLP1Q92989 425 aaKnown RBP7.94□□□□□ -1.14
RFC3-203ENST00000616236 KCNK17Q96T54 332 aa7.94□□□□□ -1.14
RFC3-203ENST00000616236 HDGFP51858 240 aaKnown RBP7.93□□□□□ -1.14
RFC3-203ENST00000616236 PTK7Q13308 1070 aa7.93□□□□□ -1.14
RFC3-203ENST00000616236 LARP1Q6PKG0 1096 aaKnown RBP7.93□□□□□ -1.14
RFC3-203ENST00000616236 RASA1P20936 1047 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 ATP2B4P23634 1241 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 LHX8Q68G74 356 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 DESI1Q6ICB0 168 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 LYPD8Q6UX82 237 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 GIPC2Q8TF65 315 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 CDCA7Q9BWT1 371 aaPredicted RBP7.92□□□□□ -1.14
RFC3-203ENST00000616236 SEPT9Q9UHD8 586 aaPredicted RBP7.92□□□□□ -1.14
RFC3-203ENST00000616236 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
RFC3-203ENST00000616236 HMGB1P09429 215 aaKnown RBP7.91□□□□□ -1.14
RFC3-203ENST00000616236 SCNN1AP37088 669 aa7.91□□□□□ -1.14
RFC3-203ENST00000616236 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
RFC3-203ENST00000616236 ZBED2Q9BTP6 218 aa7.91□□□□□ -1.14
RFC3-203ENST00000616236 BIN2Q9UBW5 565 aaPredicted RBP7.91□□□□□ -1.14
RFC3-203ENST00000616236 NCOA4Q13772 614 aa7.9□□□□□ -1.14
RFC3-203ENST00000616236 ANKMY2Q8IV38 441 aa7.9□□□□□ -1.14
RFC3-203ENST00000616236 ANKRD33BA6NCL7 494 aa7.89□□□□□ -1.15
RFC3-203ENST00000616236 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
RFC3-203ENST00000616236 HSP90B1P14625 803 aaKnown RBP7.89□□□□□ -1.15
RFC3-203ENST00000616236 PUS7Q96PZ0 661 aaKnown RBP7.89□□□□□ -1.15
RFC3-203ENST00000616236 CEP126Q9P2H0 1117 aa7.89□□□□□ -1.15
RFC3-203ENST00000616236 TCF3P15923 654 aa7.88□□□□□ -1.15
RFC3-203ENST00000616236 SLFNL1Q499Z3 407 aa7.88□□□□□ -1.15
RFC3-203ENST00000616236 MORN1Q5T089 497 aa7.88□□□□□ -1.15
RFC3-203ENST00000616236 SAMD7Q7Z3H4 446 aa7.88□□□□□ -1.15
RFC3-203ENST00000616236 DPYDQ12882 1025 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 Q3C1V9 767 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 PUS10Q3MIT2 529 aaKnown RBP7.87□□□□□ -1.15
RFC3-203ENST00000616236 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 KCNH8Q96L42 1107 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 RABGEF1Q9UJ41 708 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 SLC27A5Q9Y2P5 690 aa7.87□□□□□ -1.15
RFC3-203ENST00000616236 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
RFC3-203ENST00000616236 KCNH2Q12809 1159 aa7.86□□□□□ -1.15
RFC3-203ENST00000616236 SWI5Q1ZZU3 235 aa7.86□□□□□ -1.15
RFC3-203ENST00000616236 PLPP7Q8NBV4 271 aa7.86□□□□□ -1.15
RFC3-203ENST00000616236 LZTS3O60299 673 aaPredicted RBP7.85□□□□□ -1.15
RFC3-203ENST00000616236 RNF40O75150 1001 aa7.85□□□□□ -1.15
RFC3-203ENST00000616236 F12P00748 615 aaPredicted RBP7.85□□□□□ -1.15
RFC3-203ENST00000616236 FAM98CQ17RN3 349 aaKnown RBP7.85□□□□□ -1.15
RFC3-203ENST00000616236 KMT5BQ4FZB7 885 aa7.85□□□□□ -1.15
RFC3-203ENST00000616236 ZNF326Q5BKZ1 582 aaKnown RBP7.85□□□□□ -1.15
RFC3-203ENST00000616236 PHTF2Q8N3S3 785 aa7.85□□□□□ -1.15
RFC3-203ENST00000616236 OGFOD1Q8N543 542 aa7.85□□□□□ -1.15
RFC3-203ENST00000616236 MAP10Q9P2G4 905 aa7.85□□□□□ -1.15
RFC3-203ENST00000616236 PSEN2P49810 448 aa7.84□□□□□ -1.15
RFC3-203ENST00000616236 RNF19BQ6ZMZ0 732 aa7.84□□□□□ -1.15
RFC3-203ENST00000616236 FAM177A1Q8N128 213 aaPredicted RBP7.84□□□□□ -1.15
RFC3-203ENST00000616236 C1orf216Q8TAB5 229 aa7.84□□□□□ -1.15
RFC3-203ENST00000616236 ZNF594Q96JF6 807 aaPredicted RBP7.84□□□□□ -1.15
RFC3-203ENST00000616236 ABL1P00519 1130 aa7.83□□□□□ -1.16
RFC3-203ENST00000616236 CLDN10P78369 228 aa7.83□□□□□ -1.16
RFC3-203ENST00000616236 EML3Q32P44 896 aa7.83□□□□□ -1.16
RFC3-203ENST00000616236 BLOC1S3Q6QNY0 202 aa7.83□□□□□ -1.16
RFC3-203ENST00000616236 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
RFC3-203ENST00000616236 PRMT3O60678 531 aa7.82□□□□□ -1.16
RFC3-203ENST00000616236 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
RFC3-203ENST00000616236 USB1Q9BQ65 265 aaKnown RBP7.82□□□□□ -1.16
RFC3-203ENST00000616236 DNAAF2Q9NVR5 837 aaKnown RBP7.82□□□□□ -1.16
RFC3-203ENST00000616236 CDK11AQ9UQ88 783 aaPredicted RBP7.82□□□□□ -1.16
RFC3-203ENST00000616236 ACTN4O43707 911 aaKnown RBP7.81□□□□□ -1.16
RFC3-203ENST00000616236 VAMP1P23763 118 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 CTHP32929 405 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
RFC3-203ENST00000616236 ZNF211Q13398 564 aaPredicted RBP7.81□□□□□ -1.16
RFC3-203ENST00000616236 TSGA10IPQ3SY00 556 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 TRIM50Q86XT4 487 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 ZNF592Q92610 1267 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 ANO2Q9NQ90 1003 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 EGFL7Q9UHF1 273 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
RFC3-203ENST00000616236 H3BRB1 525 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 POTEJP0CG39 1038 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 MCCD1P59942 119 aaPredicted RBP7.8□□□□□ -1.16
RFC3-203ENST00000616236 PTK2Q05397 1052 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 TRAF7Q6Q0C0 670 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 TAS1R3Q7RTX0 852 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 DRC1Q96MC2 740 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 C8orf37Q96NL8 207 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 OCSTAMPQ9BR26 566 aa7.8□□□□□ -1.16
RFC3-203ENST00000616236 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
RFC3-203ENST00000616236 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms