RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 HLA-CQ95604 372 aa7.34□□□□□ -1.23
HMGB1P24-202ENST00000615653 C6orf118Q5T5N4 469 aa7.33□□□□□ -1.24
HMGB1P24-202ENST00000615653 KCNV2Q8TDN2 545 aa7.33□□□□□ -1.24
HMGB1P24-202ENST00000615653 PLA2G4EQ3MJ16 856 aa7.32□□□□□ -1.24
HMGB1P24-202ENST00000615653 RNFT1Q5M7Z0 435 aa7.32□□□□□ -1.24
HMGB1P24-202ENST00000615653 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
HMGB1P24-202ENST00000615653 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
HMGB1P24-202ENST00000615653 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P24-202ENST00000615653 Q8N3U1 123 aa7.31□□□□□ -1.24
HMGB1P24-202ENST00000615653 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P24-202ENST00000615653 HOXA2O43364 376 aa7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 ZIC2O95409 532 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 ITGB2P05107 769 aa7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 BAP1Q92560 729 aa7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 UNC93B1Q9H1C4 597 aa7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
HMGB1P24-202ENST00000615653 GPR37O15354 613 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 CCNYL3P0C7X3 344 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 BMP2P12643 396 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 RETREG3Q86VR2 466 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 ITPKCQ96DU7 683 aa7.29□□□□□ -1.24
HMGB1P24-202ENST00000615653 PROCP04070 461 aa7.28□□□□□ -1.24
HMGB1P24-202ENST00000615653 LINC00528Q8N1L1 170 aa7.28□□□□□ -1.24
HMGB1P24-202ENST00000615653 ZNF511Q8NB15 262 aa7.28□□□□□ -1.24
HMGB1P24-202ENST00000615653 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
HMGB1P24-202ENST00000615653 UPP2O95045 317 aa7.27□□□□□ -1.25
HMGB1P24-202ENST00000615653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.27□□□□□ -1.25
HMGB1P24-202ENST00000615653 DCAF5Q96JK2 942 aa7.27□□□□□ -1.25
HMGB1P24-202ENST00000615653 EVA1BQ9NVM1 165 aa7.27□□□□□ -1.25
HMGB1P24-202ENST00000615653 K7ELQ4 463 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P24-202ENST00000615653 GUCA2AQ02747 115 aa7.26□□□□□ -1.25
HMGB1P24-202ENST00000615653 PTSQ03393 145 aa7.26□□□□□ -1.25
HMGB1P24-202ENST00000615653 MEIOBQ8N635 442 aa7.26□□□□□ -1.25
HMGB1P24-202ENST00000615653 SEMA3EO15041 775 aa7.25□□□□□ -1.25
HMGB1P24-202ENST00000615653 MS4A1P11836 297 aa7.25□□□□□ -1.25
HMGB1P24-202ENST00000615653 FAM174AQ8TBP5 190 aa7.25□□□□□ -1.25
HMGB1P24-202ENST00000615653 KCNH2Q12809 1159 aa7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 NR5A1Q13285 461 aa7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 PTPRNQ16849 979 aa7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 RBM26Q5T8P6 1007 aaKnown RBP7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 LYPD4Q6UWN0 246 aa7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 PAXIP1Q6ZW49 1069 aaPredicted RBP7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 CFAP44Q96MT7 982 aa7.24□□□□□ -1.25
HMGB1P24-202ENST00000615653 NR3C2P08235 984 aa7.23□□□□□ -1.25
HMGB1P24-202ENST00000615653 PHF20L1A8MW92 1017 aa7.22□□□□□ -1.25
HMGB1P24-202ENST00000615653 LCE3BQ5TA77 95 aa7.22□□□□□ -1.25
HMGB1P24-202ENST00000615653 CCDC155Q8N6L0 562 aa7.22□□□□□ -1.25
HMGB1P24-202ENST00000615653 GALNT6Q8NCL4 622 aa7.22□□□□□ -1.25
HMGB1P24-202ENST00000615653 SPTLC1O15269 473 aa7.21□□□□□ -1.26
HMGB1P24-202ENST00000615653 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
HMGB1P24-202ENST00000615653 VWA5B2Q8N398 1253 aa7.21□□□□□ -1.26
HMGB1P24-202ENST00000615653 SLC35F4A4IF30 521 aa7.2□□□□□ -1.26
HMGB1P24-202ENST00000615653 TTLL8A6PVC2 850 aa7.2□□□□□ -1.26
HMGB1P24-202ENST00000615653 GRM5P41594 1212 aa7.2□□□□□ -1.26
HMGB1P24-202ENST00000615653 MAP3K10Q02779 954 aa7.2□□□□□ -1.26
HMGB1P24-202ENST00000615653 TSEN34Q9BSV6 310 aaKnown RBP7.2□□□□□ -1.26
HMGB1P24-202ENST00000615653 CELA2BP08218 269 aaPredicted RBP7.19□□□□□ -1.26
HMGB1P24-202ENST00000615653 SV2AQ7L0J3 742 aa7.19□□□□□ -1.26
HMGB1P24-202ENST00000615653 KRTAP4-12Q9BQ66 201 aa7.19□□□□□ -1.26
HMGB1P24-202ENST00000615653 ITGA6P23229 1130 aa7.18□□□□□ -1.26
HMGB1P24-202ENST00000615653 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
HMGB1P24-202ENST00000615653 ARID5BQ14865 1188 aa7.18□□□□□ -1.26
HMGB1P24-202ENST00000615653 ENAMQ9NRM1 1142 aa7.17□□□□□ -1.26
HMGB1P24-202ENST00000615653 CNTNAP5Q8WYK1 1306 aa7.17□□□□□ -1.26
HMGB1P24-202ENST00000615653 CDC14CA4D256 554 aa7.16□□□□□ -1.26
HMGB1P24-202ENST00000615653 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
HMGB1P24-202ENST00000615653 BAG6P46379 1132 aa7.16□□□□□ -1.26
HMGB1P24-202ENST00000615653 BEND7Q8N7W2 519 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P24-202ENST00000615653 PCDHGC3Q9UN70 934 aa7.16□□□□□ -1.26
HMGB1P24-202ENST00000615653 TESPA1A2RU30 521 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P24-202ENST00000615653 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
HMGB1P24-202ENST00000615653 FDX1P10109 184 aa7.14□□□□□ -1.27
HMGB1P24-202ENST00000615653 FOXJ1Q92949 421 aa7.14□□□□□ -1.27
HMGB1P24-202ENST00000615653 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
HMGB1P24-202ENST00000615653 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
HMGB1P24-202ENST00000615653 P3H3Q8IVL6 736 aa7.12□□□□□ -1.27
HMGB1P24-202ENST00000615653 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
HMGB1P24-202ENST00000615653 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
HMGB1P24-202ENST00000615653 SPINT1O43278 529 aa7.11□□□□□ -1.27
HMGB1P24-202ENST00000615653 MDM2Q00987 491 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P24-202ENST00000615653 PODNQ7Z5L7 613 aa7.11□□□□□ -1.27
HMGB1P24-202ENST00000615653 SH3RF1Q7Z6J0 888 aa7.11□□□□□ -1.27
HMGB1P24-202ENST00000615653 NUTM1Q86Y26 1132 aa7.11□□□□□ -1.27
HMGB1P24-202ENST00000615653 FURINP09958 794 aa7.1□□□□□ -1.27
HMGB1P24-202ENST00000615653 GAS6Q14393 721 aa7.1□□□□□ -1.27
HMGB1P24-202ENST00000615653 C4orf48Q5BLP8 95 aa7.1□□□□□ -1.27
HMGB1P24-202ENST00000615653 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
HMGB1P24-202ENST00000615653 EMILIN1Q9Y6C2 1016 aa7.1□□□□□ -1.27
HMGB1P24-202ENST00000615653 CTHP32929 405 aa7.07□□□□□ -1.28
HMGB1P24-202ENST00000615653 MAP4K5Q9Y4K4 846 aa7.07□□□□□ -1.28
HMGB1P24-202ENST00000615653 SENP3-EIF4A1A0A087X0R7 540 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 KRBA1A5PL33 1030 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 BTBD11A6QL63 1104 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 FSHRP23945 695 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 LYPD8Q6UX82 237 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 Q6ZVU0 165 aa7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 BPHLQ86WA6 291 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P24-202ENST00000615653 NEDD1Q8NHV4 660 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms