RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 TET3O43151 1660 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 MYOM2P54296 1465 aa10.95□□□□□ -0.66
LINC00547-201ENST00000612438 SBNO2Q9Y2G9 1366 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 UQCRHLA0A096LP55 91 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 UQCRHP07919 91 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 MORC1Q86VD1 984 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 KANK1Q14678 1352 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 DEPDC5O75140 1603 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 SHROOM2Q13796 1616 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 MAP3K4Q9Y6R4 1608 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
LINC00547-201ENST00000612438 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
LINC00547-201ENST00000612438 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
LINC00547-201ENST00000612438 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
LINC00547-201ENST00000612438 ZFYVE16Q7Z3T8 1539 aa10.93□□□□□ -0.66
LINC00547-201ENST00000612438 VWDEQ8N2E2 1590 aa10.93□□□□□ -0.66
LINC00547-201ENST00000612438 CNKSR2Q8WXI2 1034 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 ABCA6Q8N139 1617 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 CLGNO14967 610 aa10.92□□□□□ -0.66
LINC00547-201ENST00000612438 DNAJC2Q99543 621 aaKnown RBP10.92□□□□□ -0.66
LINC00547-201ENST00000612438 BCL2L13Q9BXK5 485 aa10.91□□□□□ -0.66
LINC00547-201ENST00000612438 CGNQ9P2M7 1197 aaKnown RBP10.91□□□□□ -0.66
LINC00547-201ENST00000612438 KIF3BO15066 747 aa10.91□□□□□ -0.66
LINC00547-201ENST00000612438 SLC20A2Q08357 652 aa10.91□□□□□ -0.66
LINC00547-201ENST00000612438 MCM4P33991 863 aa10.9□□□□□ -0.66
LINC00547-201ENST00000612438 MVPQ14764 893 aaKnown RBP10.9□□□□□ -0.66
LINC00547-201ENST00000612438 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
LINC00547-201ENST00000612438 MYO3AQ8NEV4 1616 aa10.9□□□□□ -0.66
LINC00547-201ENST00000612438 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
LINC00547-201ENST00000612438 MTHFSP49914 203 aa10.9□□□□□ -0.66
LINC00547-201ENST00000612438 ZBTB22O15209 634 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 HDAC5Q9UQL6 1122 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 UGGT1Q9NYU2 1555 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 ZCCHC11Q5TAX3 1644 aaKnown RBP10.89□□□□□ -0.67
LINC00547-201ENST00000612438 APPP05067 770 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 MMP14P50281 582 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 ZNF518AQ6AHZ1 1483 aa10.89□□□□□ -0.67
LINC00547-201ENST00000612438 ARAP3Q8WWN8 1544 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 TRAK2O60296 914 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 C22orf23Q9BZE7 217 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 CCDC173Q0VFZ6 552 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
LINC00547-201ENST00000612438 DZIP1LQ8IYY4 767 aaKnown RBP10.88□□□□□ -0.67
LINC00547-201ENST00000612438 CHMP5Q9NZZ3 219 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 UHRF1BP1LA0JNW5 1464 aa10.88□□□□□ -0.67
LINC00547-201ENST00000612438 C14orf37Q86TY3 774 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 PTMSP20962 102 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 KCNG1Q9UIX4 513 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 CT47B1P0C2W7 299 aaPredicted RBP10.87□□□□□ -0.67
LINC00547-201ENST00000612438 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
LINC00547-201ENST00000612438 CBX1P83916 185 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 TRAK1Q9UPV9 953 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 ATP7AQ04656 1500 aa10.87□□□□□ -0.67
LINC00547-201ENST00000612438 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
LINC00547-201ENST00000612438 HDAC1Q13547 482 aaPredicted RBP10.86□□□□□ -0.67
LINC00547-201ENST00000612438 SETBP1Q9Y6X0 1596 aa10.86□□□□□ -0.67
LINC00547-201ENST00000612438 KIF1BO60333 1816 aa10.86□□□□□ -0.67
LINC00547-201ENST00000612438 CSPP1Q1MSJ5 1256 aa10.86□□□□□ -0.67
LINC00547-201ENST00000612438 C14orf93Q9H972 538 aaKnown RBP10.86□□□□□ -0.67
LINC00547-201ENST00000612438 NOS1P29475 1434 aa10.85□□□□□ -0.67
LINC00547-201ENST00000612438 RAPGEF3O95398 923 aa10.85□□□□□ -0.67
LINC00547-201ENST00000612438 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
LINC00547-201ENST00000612438 MFAP1P55081 439 aaKnown RBP10.85□□□□□ -0.67
LINC00547-201ENST00000612438 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
LINC00547-201ENST00000612438 MROH1Q8NDA8 1641 aa10.85□□□□□ -0.67
LINC00547-201ENST00000612438 INO80Q9ULG1 1556 aaPredicted RBP10.85□□□□□ -0.67
LINC00547-201ENST00000612438 GGT6Q6P531 493 aa10.85□□□□□ -0.67
LINC00547-201ENST00000612438 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
LINC00547-201ENST00000612438 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINC00547-201ENST00000612438 USP32Q8NFA0 1604 aa10.84□□□□□ -0.67
LINC00547-201ENST00000612438 SASS6Q6UVJ0 657 aa10.84□□□□□ -0.67
LINC00547-201ENST00000612438 CERS3Q8IU89 383 aa10.84□□□□□ -0.67
LINC00547-201ENST00000612438 EFCAB6Q5THR3 1501 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 TRIM27P14373 513 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 AEBP1Q8IUX7 1158 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 SMC5Q8IY18 1101 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 PUS7Q96PZ0 661 aaKnown RBP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 ZNF692Q9BU19 519 aaPredicted RBP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 ADGRL1O94910 1474 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 MROH2AA6NES4 1674 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 TSR2Q969E8 191 aaKnown RBP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 ZNF622Q969S3 477 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 PPP1R9BQ96SB3 815 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 SMC4Q9NTJ3 1288 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 KCNJ4P48050 445 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 FAM193AP78312 1265 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 EXOSC9Q06265 439 aaKnown RBP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 PLPPR3Q6T4P5 718 aa10.83□□□□□ -0.68
LINC00547-201ENST00000612438 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00547-201ENST00000612438 HSCBQ8IWL3 235 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 SSH1Q8WYL5 1049 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 NSD2O96028 1365 aa10.82□□□□□ -0.68
LINC00547-201ENST00000612438 FANCAO15360 1455 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms