RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 PRAM1Q96QH2 718 aa20.61■□□□□ 0.89
LINC00116-203ENST00000611969 EZH2Q15910 746 aaKnown RBP20.6■□□□□ 0.89
LINC00116-203ENST00000611969 CFAP70Q5T0N1 1121 aa20.58■□□□□ 0.89
LINC00116-203ENST00000611969 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
LINC00116-203ENST00000611969 ADGRB1O14514 1584 aa20.58■□□□□ 0.88
LINC00116-203ENST00000611969 TULP4Q9NRJ4 1543 aa20.57■□□□□ 0.88
LINC00116-203ENST00000611969 DHX57Q6P158 1386 aaKnown RBP20.57■□□□□ 0.88
LINC00116-203ENST00000611969 PRR36Q9H6K5 1346 aa20.55■□□□□ 0.88
LINC00116-203ENST00000611969 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
LINC00116-203ENST00000611969 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
LINC00116-203ENST00000611969 CAMKK2Q96RR4 588 aa20.54■□□□□ 0.88
LINC00116-203ENST00000611969 TRIM37O94972 964 aa20.53■□□□□ 0.88
LINC00116-203ENST00000611969 MPHOSPH9Q99550 1183 aa20.53■□□□□ 0.88
LINC00116-203ENST00000611969 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
LINC00116-203ENST00000611969 HIRIP3Q9BW71 556 aaPredicted RBP20.52■□□□□ 0.88
LINC00116-203ENST00000611969 SPATA31A1Q5TZJ5 1347 aa20.52■□□□□ 0.87
LINC00116-203ENST00000611969 PRDM11Q9NQV5 511 aa20.51■□□□□ 0.87
LINC00116-203ENST00000611969 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
LINC00116-203ENST00000611969 POGKQ9P215 609 aa20.5■□□□□ 0.87
LINC00116-203ENST00000611969 PARD3Q8TEW0 1356 aa20.49■□□□□ 0.87
LINC00116-203ENST00000611969 KIAA0232Q92628 1395 aa20.49■□□□□ 0.87
LINC00116-203ENST00000611969 YY1P25490 414 aa20.49■□□□□ 0.87
LINC00116-203ENST00000611969 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
LINC00116-203ENST00000611969 NRKQ7Z2Y5 1582 aa20.48■□□□□ 0.87
LINC00116-203ENST00000611969 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
LINC00116-203ENST00000611969 APBA3O96018 575 aa20.47■□□□□ 0.87
LINC00116-203ENST00000611969 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
LINC00116-203ENST00000611969 TOPAZ1Q8N9V7 1692 aa20.47■□□□□ 0.87
LINC00116-203ENST00000611969 EIF3AQ14152 1382 aaKnown RBP20.46■□□□□ 0.87
LINC00116-203ENST00000611969 LMO7Q8WWI1 1683 aa20.46■□□□□ 0.87
LINC00116-203ENST00000611969 ATP7BP35670 1465 aa20.46■□□□□ 0.87
LINC00116-203ENST00000611969 FAM196AQ6ZSG2 479 aa20.46■□□□□ 0.87
LINC00116-203ENST00000611969 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
LINC00116-203ENST00000611969 STRN4Q9NRL3 753 aa20.45■□□□□ 0.86
LINC00116-203ENST00000611969 PARP4Q9UKK3 1724 aaKnown RBP20.44■□□□□ 0.86
LINC00116-203ENST00000611969 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
LINC00116-203ENST00000611969 SSH2Q76I76 1423 aa20.44■□□□□ 0.86
LINC00116-203ENST00000611969 RGPD3A6NKT7 1758 aaPredicted RBP20.42■□□□□ 0.86
LINC00116-203ENST00000611969 RGPD4Q7Z3J3 1758 aa20.42■□□□□ 0.86
LINC00116-203ENST00000611969 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
LINC00116-203ENST00000611969 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
LINC00116-203ENST00000611969 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
LINC00116-203ENST00000611969 PEAK1Q9H792 1746 aa20.41■□□□□ 0.86
LINC00116-203ENST00000611969 SBF2Q86WG5 1849 aa20.41■□□□□ 0.86
LINC00116-203ENST00000611969 WASLO00401 505 aaPredicted RBP20.41■□□□□ 0.86
LINC00116-203ENST00000611969 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
LINC00116-203ENST00000611969 LRRC37A3O60309 1634 aa20.38■□□□□ 0.85
LINC00116-203ENST00000611969 NUTM2GQ5VZR2 741 aa20.38■□□□□ 0.85
LINC00116-203ENST00000611969 NINLQ9Y2I6 1382 aa20.37■□□□□ 0.85
LINC00116-203ENST00000611969 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
LINC00116-203ENST00000611969 BARGINQ6ZT62 677 aa20.37■□□□□ 0.85
LINC00116-203ENST00000611969 MYOM1P52179 1685 aa20.37■□□□□ 0.85
LINC00116-203ENST00000611969 PDE3BQ13370 1112 aa20.35■□□□□ 0.85
LINC00116-203ENST00000611969 NBPF8Q3BBV2 869 aa20.35■□□□□ 0.85
LINC00116-203ENST00000611969 NBPF14Q5TI25 921 aa20.35■□□□□ 0.85
LINC00116-203ENST00000611969 LARP1Q6PKG0 1096 aaKnown RBP20.35■□□□□ 0.85
LINC00116-203ENST00000611969 PPP1R1BQ9UD71 204 aaPredicted RBP20.35■□□□□ 0.85
LINC00116-203ENST00000611969 SPON1Q9HCB6 807 aa20.34■□□□□ 0.85
LINC00116-203ENST00000611969 KCNQ2O43526 872 aa20.33■□□□□ 0.85
LINC00116-203ENST00000611969 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
LINC00116-203ENST00000611969 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
LINC00116-203ENST00000611969 COL5A2P05997 1499 aaPredicted RBP20.31■□□□□ 0.84
LINC00116-203ENST00000611969 EVA1CP58658 441 aa20.31■□□□□ 0.84
LINC00116-203ENST00000611969 TCP11L2Q8N4U5 519 aa20.31■□□□□ 0.84
LINC00116-203ENST00000611969 CPDO75976 1380 aa20.31■□□□□ 0.84
LINC00116-203ENST00000611969 ANO8Q9HCE9 1232 aaPredicted RBP20.3■□□□□ 0.84
LINC00116-203ENST00000611969 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
LINC00116-203ENST00000611969 USP19O94966 1318 aa20.28■□□□□ 0.84
LINC00116-203ENST00000611969 OVOS2A0A0G2JMS6 1433 aa20.28■□□□□ 0.84
LINC00116-203ENST00000611969 OVOS2A0A0J9YW53 1432 aa20.28■□□□□ 0.84
LINC00116-203ENST00000611969 OVOS2Q6IE36 1432 aa20.28■□□□□ 0.84
LINC00116-203ENST00000611969 KDM2AQ9Y2K7 1162 aa20.27■□□□□ 0.84
LINC00116-203ENST00000611969 ACEP12821 1306 aa20.27■□□□□ 0.83
LINC00116-203ENST00000611969 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
LINC00116-203ENST00000611969 COL18A1P39060 1754 aa20.24■□□□□ 0.83
LINC00116-203ENST00000611969 PTF1AQ7RTS3 328 aa20.24■□□□□ 0.83
LINC00116-203ENST00000611969 DCAF11Q8TEB1 546 aa20.24■□□□□ 0.83
LINC00116-203ENST00000611969 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
LINC00116-203ENST00000611969 CRB1P82279 1406 aa20.24■□□□□ 0.83
LINC00116-203ENST00000611969 CHD4Q14839 1912 aa20.23■□□□□ 0.83
LINC00116-203ENST00000611969 DCAF8L1A6NGE4 600 aa20.23■□□□□ 0.83
LINC00116-203ENST00000611969 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
LINC00116-203ENST00000611969 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
LINC00116-203ENST00000611969 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
LINC00116-203ENST00000611969 SLIT3O75094 1523 aa20.21■□□□□ 0.83
LINC00116-203ENST00000611969 PIK3C2AO00443 1686 aa20.2■□□□□ 0.82
LINC00116-203ENST00000611969 KIAA1210Q9ULL0 1709 aa20.2■□□□□ 0.82
LINC00116-203ENST00000611969 UTRNP46939 3433 aa20.2■□□□□ 0.82
LINC00116-203ENST00000611969 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
LINC00116-203ENST00000611969 ZBTB7AO95365 584 aa20.19■□□□□ 0.82
LINC00116-203ENST00000611969 ZNF784Q8NCA9 323 aaPredicted RBP20.19■□□□□ 0.82
LINC00116-203ENST00000611969 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
LINC00116-203ENST00000611969 PLSCR1O15162 318 aa20.18■□□□□ 0.82
LINC00116-203ENST00000611969 GCP02774 474 aa20.18■□□□□ 0.82
LINC00116-203ENST00000611969 PTGER2P43116 358 aa20.18■□□□□ 0.82
LINC00116-203ENST00000611969 CCDC61Q9Y6R9 512 aa20.18■□□□□ 0.82
LINC00116-203ENST00000611969 PPIP5K1Q6PFW1 1433 aa20.17■□□□□ 0.82
LINC00116-203ENST00000611969 QRICH2Q9H0J4 1663 aa20.16■□□□□ 0.82
LINC00116-203ENST00000611969 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
LINC00116-203ENST00000611969 PROM2Q8N271 834 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms