RNA–Protein interactions for RNA: ENST00000610023.1

PDE4C-217, Transcript of phosphodiesterase 4C, humanhuman

TSL 4

Gene PDE4C, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-217ENST00000610023 USP21Q9UK80 565 aa30.24■■■□□ 2.43
PDE4C-217ENST00000610023 CDK12Q9NYV4 1490 aaPredicted RBP30.24■■■□□ 2.43
PDE4C-217ENST00000610023 PLCH1Q4KWH8 1693 aa30.23■■■□□ 2.43
PDE4C-217ENST00000610023 RXRBP28702 533 aa30.23■■■□□ 2.43
PDE4C-217ENST00000610023 PHRF1Q9P1Y6 1649 aaKnown RBP30.22■■■□□ 2.43
PDE4C-217ENST00000610023 QTRT2Q9H974 415 aaKnown RBP30.21■■■□□ 2.43
PDE4C-217ENST00000610023 TIMELESSQ9UNS1 1208 aa30.21■■■□□ 2.43
PDE4C-217ENST00000610023 SLIT2O94813 1529 aa30.21■■■□□ 2.43
PDE4C-217ENST00000610023 ATAD2Q6PL18 1390 aa30.2■■■□□ 2.43
PDE4C-217ENST00000610023 ATRNO75882 1429 aa30.2■■■□□ 2.42
PDE4C-217ENST00000610023 BCL9LQ86UU0 1499 aa30.19■■■□□ 2.42
PDE4C-217ENST00000610023 NWD2Q9ULI1 1742 aa30.19■■■□□ 2.42
PDE4C-217ENST00000610023 TRPC5Q9UL62 973 aaPredicted RBP30.18■■■□□ 2.42
PDE4C-217ENST00000610023 RBM6P78332 1123 aaKnown RBP30.17■■■□□ 2.42
PDE4C-217ENST00000610023 CCER1Q8TC90 406 aaPredicted RBP30.17■■■□□ 2.42
PDE4C-217ENST00000610023 CABP1Q9NZU7 370 aa30.17■■■□□ 2.42
PDE4C-217ENST00000610023 BRD4O60885 1362 aaPredicted RBP30.16■■■□□ 2.42
PDE4C-217ENST00000610023 AKAP12Q02952 1782 aa30.16■■■□□ 2.42
PDE4C-217ENST00000610023 USP6P35125 1406 aa30.16■■■□□ 2.42
PDE4C-217ENST00000610023 RGS12O14924 1447 aa30.15■■■□□ 2.42
PDE4C-217ENST00000610023 COL14A1Q05707 1796 aaKnown RBP30.14■■■□□ 2.42
PDE4C-217ENST00000610023 NRKQ7Z2Y5 1582 aa30.11■■■□□ 2.41
PDE4C-217ENST00000610023 NRAPQ86VF7 1730 aa30.1■■■□□ 2.41
PDE4C-217ENST00000610023 UNC5CLQ8IV45 518 aa30.1■■■□□ 2.41
PDE4C-217ENST00000610023 USP47Q96K76 1375 aa30.1■■■□□ 2.41
PDE4C-217ENST00000610023 MON2Q7Z3U7 1717 aa30.08■■■□□ 2.41
PDE4C-217ENST00000610023 NUTM2GQ5VZR2 741 aa30.08■■■□□ 2.41
PDE4C-217ENST00000610023 ABTB2Q8N961 1025 aa30.08■■■□□ 2.41
PDE4C-217ENST00000610023 ST20-MTHFSA0A0A6YYL1 179 aa30.07■■■□□ 2.4
PDE4C-217ENST00000610023 PIK3C2AO00443 1686 aa30.07■■■□□ 2.4
PDE4C-217ENST00000610023 GLI3P10071 1580 aa30.06■■■□□ 2.4
PDE4C-217ENST00000610023 SSH2Q76I76 1423 aa30.05■■■□□ 2.4
PDE4C-217ENST00000610023 USP19O94966 1318 aa30.05■■■□□ 2.4
PDE4C-217ENST00000610023 TESK2Q96S53 571 aa30.05■■■□□ 2.4
PDE4C-217ENST00000610023 CPSF1Q10570 1443 aaKnown RBP30.05■■■□□ 2.4
PDE4C-217ENST00000610023 FAM83GA6ND36 823 aa30.04■■■□□ 2.4
PDE4C-217ENST00000610023 NLRP13Q86W25 1043 aa30.02■■■□□ 2.4
PDE4C-217ENST00000610023 ZNF692Q9BU19 519 aaPredicted RBP30.02■■■□□ 2.4
PDE4C-217ENST00000610023 PRDM11Q9NQV5 511 aa30.02■■■□□ 2.4
PDE4C-217ENST00000610023 KIAA0232Q92628 1395 aa30.02■■■□□ 2.4
PDE4C-217ENST00000610023 SLC24A1O60721 1099 aa30.01■■■□□ 2.39
PDE4C-217ENST00000610023 GJD4Q96KN9 370 aaPredicted RBP30.01■■■□□ 2.39
PDE4C-217ENST00000610023 KTN1Q86UP2 1357 aaKnown RBP30.01■■■□□ 2.39
PDE4C-217ENST00000610023 PUS7Q96PZ0 661 aaKnown RBP30■■■□□ 2.39
PDE4C-217ENST00000610023 SLIT3O75094 1523 aa30■■■□□ 2.39
PDE4C-217ENST00000610023 CD163L1Q9NR16 1453 aa29.99■■■□□ 2.39
PDE4C-217ENST00000610023 VPS72Q15906 364 aa29.98■■■□□ 2.39
PDE4C-217ENST00000610023 BTG4Q9NY30 223 aa29.98■■■□□ 2.39
PDE4C-217ENST00000610023 TTC21BQ7Z4L5 1316 aa29.97■■■□□ 2.39
PDE4C-217ENST00000610023 TTC21AQ8NDW8 1320 aa29.96■■■□□ 2.39
PDE4C-217ENST00000610023 NINLQ9Y2I6 1382 aa29.96■■■□□ 2.39
PDE4C-217ENST00000610023 ZC3H6P61129 1189 aaKnown RBP29.96■■■□□ 2.39
PDE4C-217ENST00000610023 TMC1Q8TDI8 760 aa29.96■■■□□ 2.39
PDE4C-217ENST00000610023 CPDO75976 1380 aa29.95■■■□□ 2.39
PDE4C-217ENST00000610023 NLRP6P59044 892 aa29.94■■■□□ 2.38
PDE4C-217ENST00000610023 CCDC9Q9Y3X0 531 aaKnown RBP29.94■■■□□ 2.38
PDE4C-217ENST00000610023 LMO7Q8WWI1 1683 aa29.94■■■□□ 2.38
PDE4C-217ENST00000610023 HDGFL2Q7Z4V5 671 aaPredicted RBP29.93■■■□□ 2.38
PDE4C-217ENST00000610023 USP54Q70EL1 1684 aa29.92■■■□□ 2.38
PDE4C-217ENST00000610023 GCP02774 474 aa29.92■■■□□ 2.38
PDE4C-217ENST00000610023 TMF1P82094 1093 aa29.92■■■□□ 2.38
PDE4C-217ENST00000610023 CHRNA2Q15822 529 aa29.92■■■□□ 2.38
PDE4C-217ENST00000610023 A0A1W2PP64 1363 aa29.91■■■□□ 2.38
PDE4C-217ENST00000610023 SLC12A5Q9H2X9 1139 aa29.91■■■□□ 2.38
PDE4C-217ENST00000610023 EDC4Q6P2E9 1401 aaKnown RBP29.9■■■□□ 2.38
PDE4C-217ENST00000610023 TERF2IPQ9NYB0 399 aa29.89■■■□□ 2.38
PDE4C-217ENST00000610023 BRWD3Q6RI45 1802 aa29.86■■■□□ 2.37
PDE4C-217ENST00000610023 CAMTA1Q9Y6Y1 1673 aa29.85■■■□□ 2.37
PDE4C-217ENST00000610023 UPF1Q92900 1129 aaKnown RBP eCLIP29.85■■■□□ 2.37
PDE4C-217ENST00000610023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.84■■■□□ 2.37
PDE4C-217ENST00000610023 NFAT5O94916 1531 aa29.83■■■□□ 2.37
PDE4C-217ENST00000610023 CDCA8Q53HL2 280 aa29.83■■■□□ 2.37
PDE4C-217ENST00000610023 USP31Q70CQ4 1352 aa29.82■■■□□ 2.36
PDE4C-217ENST00000610023 SPATA31A5Q5VU36 1347 aa29.82■■■□□ 2.36
PDE4C-217ENST00000610023 SPATA31A7Q8IWB4 1347 aa29.82■■■□□ 2.36
PDE4C-217ENST00000610023 STRN4Q9NRL3 753 aa29.82■■■□□ 2.36
PDE4C-217ENST00000610023 MYOM1P52179 1685 aa29.82■■■□□ 2.36
PDE4C-217ENST00000610023 ANKRD36BQ8N2N9 1353 aa29.81■■■□□ 2.36
PDE4C-217ENST00000610023 KCNH5Q8NCM2 988 aa29.81■■■□□ 2.36
PDE4C-217ENST00000610023 THSD7AQ9UPZ6 1657 aa29.8■■■□□ 2.36
PDE4C-217ENST00000610023 ZBTB7CA1YPR0 619 aa29.8■■■□□ 2.36
PDE4C-217ENST00000610023 SEPT12Q8IYM1 358 aa29.8■■■□□ 2.36
PDE4C-217ENST00000610023 COL5A2P05997 1499 aaPredicted RBP29.8■■■□□ 2.36
PDE4C-217ENST00000610023 COL18A1P39060 1754 aa29.8■■■□□ 2.36
PDE4C-217ENST00000610023 AATKQ6ZMQ8 1374 aa29.79■■■□□ 2.36
PDE4C-217ENST00000610023 NME9Q86XW9 330 aa29.79■■■□□ 2.36
PDE4C-217ENST00000610023 EP400Q96L91 3159 aa29.78■■■□□ 2.36
PDE4C-217ENST00000610023 A0A0G2JS52 829 aa29.78■■■□□ 2.36
PDE4C-217ENST00000610023 ONECUT3O60422 494 aaPredicted RBP29.78■■■□□ 2.36
PDE4C-217ENST00000610023 MYT1Q01538 1121 aa29.78■■■□□ 2.36
PDE4C-217ENST00000610023 FAM98CQ17RN3 349 aaKnown RBP29.78■■■□□ 2.36
PDE4C-217ENST00000610023 OVOS2A0A0J9YW53 1432 aa29.77■■■□□ 2.36
PDE4C-217ENST00000610023 OVOS2Q6IE36 1432 aa29.77■■■□□ 2.36
PDE4C-217ENST00000610023 ABCC6O95255 1503 aa29.76■■■□□ 2.36
PDE4C-217ENST00000610023 SPATA31A1Q5TZJ5 1347 aa29.76■■■□□ 2.36
PDE4C-217ENST00000610023 SOX12O15370 315 aa29.76■■■□□ 2.35
PDE4C-217ENST00000610023 EVA1CP58658 441 aa29.76■■■□□ 2.35
PDE4C-217ENST00000610023 EIF4G2P78344 907 aaKnown RBP eCLIP29.75■■■□□ 2.35
PDE4C-217ENST00000610023 ZRANB1Q9UGI0 708 aa29.75■■■□□ 2.35
PDE4C-217ENST00000610023 LTN1O94822 1766 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms