RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
HDDC2-204ENST00000608295 RGS12O14924 1447 aa20.56■□□□□ 0.88
HDDC2-204ENST00000608295 POLR3AO14802 1390 aaPredicted RBP20.56■□□□□ 0.88
HDDC2-204ENST00000608295 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.56■□□□□ 0.88
HDDC2-204ENST00000608295 CABP1Q9NZU7 370 aa20.55■□□□□ 0.88
HDDC2-204ENST00000608295 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
HDDC2-204ENST00000608295 AKAP12Q02952 1782 aa20.53■□□□□ 0.88
HDDC2-204ENST00000608295 ATRNO75882 1429 aa20.53■□□□□ 0.88
HDDC2-204ENST00000608295 PLEKHG3A1L390 1219 aa20.52■□□□□ 0.88
HDDC2-204ENST00000608295 FNBP4Q8N3X1 1017 aaPredicted RBP20.52■□□□□ 0.88
HDDC2-204ENST00000608295 TRPC5Q9UL62 973 aaPredicted RBP20.52■□□□□ 0.88
HDDC2-204ENST00000608295 SLIT2O94813 1529 aa20.52■□□□□ 0.87
HDDC2-204ENST00000608295 NWD2Q9ULI1 1742 aa20.51■□□□□ 0.87
HDDC2-204ENST00000608295 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
HDDC2-204ENST00000608295 NRAPQ86VF7 1730 aa20.5■□□□□ 0.87
HDDC2-204ENST00000608295 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
HDDC2-204ENST00000608295 RBM6P78332 1123 aaKnown RBP20.5■□□□□ 0.87
HDDC2-204ENST00000608295 USP6P35125 1406 aa20.5■□□□□ 0.87
HDDC2-204ENST00000608295 PIK3C2AO00443 1686 aa20.49■□□□□ 0.87
HDDC2-204ENST00000608295 CCDC9Q9Y3X0 531 aaKnown RBP20.49■□□□□ 0.87
HDDC2-204ENST00000608295 GLI3P10071 1580 aa20.49■□□□□ 0.87
HDDC2-204ENST00000608295 ABTB2Q8N961 1025 aa20.48■□□□□ 0.87
HDDC2-204ENST00000608295 CDK12Q9NYV4 1490 aaPredicted RBP20.48■□□□□ 0.87
HDDC2-204ENST00000608295 ATAD2Q6PL18 1390 aa20.47■□□□□ 0.87
HDDC2-204ENST00000608295 SBNO2Q9Y2G9 1366 aa20.47■□□□□ 0.87
HDDC2-204ENST00000608295 ST20-MTHFSA0A0A6YYL1 179 aa20.47■□□□□ 0.87
HDDC2-204ENST00000608295 FAM83GA6ND36 823 aa20.47■□□□□ 0.87
HDDC2-204ENST00000608295 MON2Q7Z3U7 1717 aa20.47■□□□□ 0.87
HDDC2-204ENST00000608295 USP47Q96K76 1375 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 ZBTB7CA1YPR0 619 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
HDDC2-204ENST00000608295 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 UNC5CLQ8IV45 518 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 PRDM11Q9NQV5 511 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
HDDC2-204ENST00000608295 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
HDDC2-204ENST00000608295 BTG4Q9NY30 223 aa20.44■□□□□ 0.86
HDDC2-204ENST00000608295 SOX12O15370 315 aa20.42■□□□□ 0.86
HDDC2-204ENST00000608295 GJD4Q96KN9 370 aaPredicted RBP20.42■□□□□ 0.86
HDDC2-204ENST00000608295 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
HDDC2-204ENST00000608295 BRWD3Q6RI45 1802 aa20.41■□□□□ 0.86
HDDC2-204ENST00000608295 A0A0G2JS52 829 aa20.4■□□□□ 0.86
HDDC2-204ENST00000608295 NLRP6P59044 892 aa20.4■□□□□ 0.86
HDDC2-204ENST00000608295 MYT1Q01538 1121 aa20.4■□□□□ 0.86
HDDC2-204ENST00000608295 TESK2Q96S53 571 aa20.4■□□□□ 0.86
HDDC2-204ENST00000608295 STRN4Q9NRL3 753 aa20.4■□□□□ 0.86
HDDC2-204ENST00000608295 CD163L1Q9NR16 1453 aa20.39■□□□□ 0.85
HDDC2-204ENST00000608295 USP19O94966 1318 aa20.39■□□□□ 0.85
HDDC2-204ENST00000608295 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.39■□□□□ 0.85
HDDC2-204ENST00000608295 CPSF1Q10570 1443 aaKnown RBP20.38■□□□□ 0.85
HDDC2-204ENST00000608295 SSH2Q76I76 1423 aa20.38■□□□□ 0.85
HDDC2-204ENST00000608295 NLRP13Q86W25 1043 aa20.38■□□□□ 0.85
HDDC2-204ENST00000608295 SLC12A5Q9H2X9 1139 aa20.38■□□□□ 0.85
HDDC2-204ENST00000608295 TTC21BQ7Z4L5 1316 aa20.37■□□□□ 0.85
HDDC2-204ENST00000608295 VPS72Q15906 364 aa20.37■□□□□ 0.85
HDDC2-204ENST00000608295 SLIT3O75094 1523 aa20.37■□□□□ 0.85
HDDC2-204ENST00000608295 LMO7Q8WWI1 1683 aa20.36■□□□□ 0.85
HDDC2-204ENST00000608295 ZRANB1Q9UGI0 708 aa20.36■□□□□ 0.85
HDDC2-204ENST00000608295 A0A1W2PP64 1363 aa20.35■□□□□ 0.85
HDDC2-204ENST00000608295 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
HDDC2-204ENST00000608295 GCP02774 474 aa20.34■□□□□ 0.85
HDDC2-204ENST00000608295 UPF1Q92900 1129 aaKnown RBP eCLIP20.34■□□□□ 0.85
HDDC2-204ENST00000608295 CAMTA1Q9Y6Y1 1673 aa20.33■□□□□ 0.85
HDDC2-204ENST00000608295 FAM98CQ17RN3 349 aaKnown RBP20.33■□□□□ 0.85
HDDC2-204ENST00000608295 HDGFL2Q7Z4V5 671 aaPredicted RBP20.33■□□□□ 0.85
HDDC2-204ENST00000608295 NME9Q86XW9 330 aa20.33■□□□□ 0.85
HDDC2-204ENST00000608295 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
HDDC2-204ENST00000608295 RGPD5Q99666 1765 aa20.33■□□□□ 0.84
HDDC2-204ENST00000608295 ZNF692Q9BU19 519 aaPredicted RBP20.32■□□□□ 0.84
HDDC2-204ENST00000608295 USP35Q9P2H5 1018 aa20.32■□□□□ 0.84
HDDC2-204ENST00000608295 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
HDDC2-204ENST00000608295 TMF1P82094 1093 aa20.31■□□□□ 0.84
HDDC2-204ENST00000608295 SEPT12Q8IYM1 358 aa20.31■□□□□ 0.84
HDDC2-204ENST00000608295 MYOM1P52179 1685 aa20.31■□□□□ 0.84
HDDC2-204ENST00000608295 POLR3GLQ9BT43 218 aa20.3■□□□□ 0.84
HDDC2-204ENST00000608295 CPDO75976 1380 aa20.3■□□□□ 0.84
HDDC2-204ENST00000608295 LTN1O94822 1766 aa20.29■□□□□ 0.84
HDDC2-204ENST00000608295 EDC4Q6P2E9 1401 aaKnown RBP20.28■□□□□ 0.84
HDDC2-204ENST00000608295 NFAT5O94916 1531 aa20.28■□□□□ 0.84
HDDC2-204ENST00000608295 EVA1CP58658 441 aa20.28■□□□□ 0.84
HDDC2-204ENST00000608295 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
HDDC2-204ENST00000608295 SPATA31A5Q5VU36 1347 aa20.27■□□□□ 0.84
HDDC2-204ENST00000608295 SPATA31A7Q8IWB4 1347 aa20.27■□□□□ 0.84
HDDC2-204ENST00000608295 COL18A1P39060 1754 aa20.27■□□□□ 0.84
HDDC2-204ENST00000608295 USP54Q70EL1 1684 aa20.27■□□□□ 0.84
HDDC2-204ENST00000608295 COL5A2P05997 1499 aaPredicted RBP20.27■□□□□ 0.84
HDDC2-204ENST00000608295 THSD7AQ9UPZ6 1657 aa20.26■□□□□ 0.83
HDDC2-204ENST00000608295 LARP1Q6PKG0 1096 aaKnown RBP20.26■□□□□ 0.83
HDDC2-204ENST00000608295 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
HDDC2-204ENST00000608295 NINLQ9Y2I6 1382 aa20.24■□□□□ 0.83
HDDC2-204ENST00000608295 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
HDDC2-204ENST00000608295 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
HDDC2-204ENST00000608295 HSPA5P11021 654 aaKnown RBP20.23■□□□□ 0.83
HDDC2-204ENST00000608295 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
HDDC2-204ENST00000608295 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
HDDC2-204ENST00000608295 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
HDDC2-204ENST00000608295 KRT27Q7Z3Y8 459 aa20.22■□□□□ 0.83
HDDC2-204ENST00000608295 EP400Q96L91 3159 aa20.22■□□□□ 0.83
HDDC2-204ENST00000608295 WNK3Q9BYP7 1800 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms